Chien-Chang Feng 630d7e19db py-yt: Yt-project is moved. Add new version. (#6409)		2017-11-23 07:25:35 +01:00
..
abinit
abyss
ack
activeharmony
adept-utils
adios
adios2
adlbx
adol-c
albert
alglib
allinea-forge
allinea-reports
allpaths-lg
alquimia
alsa-lib
amg
amg2013
ampliconnoise
amr-exp-parabolic
amrex
andi
angsd
ant
antlr
ape
apex
applewmproto
appres
apr
apr-util
archer
argtable
arlecore
armadillo
arpack-ng
ascent
asciidoc
aspa
aspell
aspell6-de
aspell6-en
aspell6-es
assimp
astra
astral
astyle
atk
atlas	Atlas: add 3.11.39 (#6375)	2017-11-20 11:57:34 -07:00
atompaw
atop
augustus
autoconf
autodock-vina
autogen
automaded
automake
bamtools
bamutil
bash
bash-completion
bats
bazel
bbcp
bbmap
bcftools
bcl2fastq2
bdftopcf
bdw-gc
bear
beast2
bedtools2
beforelight
benchmark
berkeley-db
bertini
bib2xhtml
bigreqsproto
binutils
bioawk
bison
bitmap
blast-plus
blat
blaze
bliss
blitz
bml
boost
boostmplcartesianproduct
bowtie
bowtie2
boxlib
bpp-core
bpp-phyl
bpp-seq
bpp-suite
braker
branson
brigand
bsseeker2
bucky
busco
butter
bwa
byobu
bzip2
c-blosc
caffe
cairo
caliper
callpath
candle-benchmarks
cantera
canu
cap3
cares
cask
catch
cbench
cblas
cbtf
cbtf-argonavis
cbtf-argonavis-gui
cbtf-krell
cbtf-lanl
ccache
cctools
cdbfasta
cdd
cddlib
cdhit
cdo
cereal
cfitsio
cgal
cgm
cgns
charm
check
chlorop
chombo
cityhash
clamr
cleaveland4
cleverleaf
clfft
clhep
cloc
cloog
cloverleaf
cloverleaf3d
clustalo
clustalw
cmake	CMake: add 3.10.0 (#6393)	2017-11-21 08:04:53 -07:00
cmocka
cmor
cnmem
cnpy
cns-nospec
cntk
cntk1bitsgd
codar-cheetah
coevp
cohmm
coinhsl
comd
compiz
compositeproto
conduit
constype
converge
coreutils
corset
cosmomc
cosp2
cp2k
cppad
cppcheck
cpprestsdk
cppunit
cppzmq
cram
cryptopp
cscope
csdp
cub
cube
cuda
cuda-memtest
cudnn
cufflinks
cups
curl
cvs
czmq
dakota
daligner
damageproto
damselfly
darshan-runtime
darshan-util
dash
datamash
dataspaces
dbus
dealii	dealii: fix HDF5 dependency (#6374)	2017-11-20 11:57:53 -07:00
dejagnu
delly2
dia
dialign-tx
direnv
discovar
dlpack
dmlc-core
dmxproto
docbook-xml
docbook-xsl
dos2unix
double-conversion
doxygen
dri2proto
dri3proto
dtcmp
dyninst
ea-utils
easybuild
ebms
eccodes	Script for 'eccodes' is compatible with Python 3. (#6402)	2017-11-21 15:59:04 -07:00
ecp-proxy-apps
editres
eigen
elemental
elfutils
elk
elpa	elpa: add 2017.05.002 and 2017.05.003 (#5306)	2017-11-20 11:17:22 -07:00
emacs
emboss
encodings
environment-modules
es
esmf
espresso
etsf-io
everytrace
everytrace-example
evieext
exabayes
exampm
exasp2
exmcutils
exodusii
exonerate
expat
expect
extrae
exuberant-ctags
f90cache
falcon
farmhash
fastjar
fastmath
fastme
fastphase
fastq-screen
fastqc
fastqvalidator
fastx-toolkit
fenics
ferret
ffmpeg
fftw
fimpute
findutils
fio
fish
fixesproto
flac
flang
flann
flash
flecsale
flecsi
flex
flint
fltk
flux	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
fmt
foam-extend
folly
font-adobe-75dpi
font-adobe-100dpi
font-adobe-utopia-75dpi
font-adobe-utopia-100dpi
font-adobe-utopia-type1
font-alias
font-arabic-misc
font-bh-75dpi
font-bh-100dpi
font-bh-lucidatypewriter-75dpi
font-bh-lucidatypewriter-100dpi
font-bh-ttf
font-bh-type1
font-bitstream-75dpi
font-bitstream-100dpi
font-bitstream-speedo
font-bitstream-type1
font-cronyx-cyrillic
font-cursor-misc
font-daewoo-misc
font-dec-misc
font-ibm-type1
font-isas-misc
font-jis-misc
font-micro-misc
font-misc-cyrillic
font-misc-ethiopic
font-misc-meltho
font-misc-misc
font-mutt-misc
font-schumacher-misc
font-screen-cyrillic
font-sony-misc
font-sun-misc
font-util
font-winitzki-cyrillic
font-xfree86-type1
fontcacheproto
fontconfig
fontsproto
fonttosfnt
fpc
freebayes
freetype
fseq
fsl
fslsfonts
fstobdf
funhpc
gapcloser
gapfiller
gasnet
gaussian
gawk
gblocks
gcc
gccmakedep
gccxml
gconf
gdal
gdb
gdbm
gdk-pixbuf
geant4
gearshifft
gemmlowp
genemark-et
genometools
geos
gettext
gflags
ghostscript
ghostscript-fonts
giflib
git
git-lfs
gl2ps
glew
glib
glm
global
globalarrays
globus-toolkit
glog
glpk
glproto
gmake
gmap-gsnap
gmime
gmp
gmsh
gnat
gnu-prolog
gnupg
gnuplot
gnutls
go
go-bootstrap
gobject-introspection
googletest
gotcha	gotcha: new package (#6391)	2017-11-21 08:04:43 -07:00
gource
gperf
gperftools
grackle
gradle
grandr
graphlib
graphmap
graphviz
grib-api
groff
gromacs
gsl
gtkorvo-atl
gtkorvo-cercs-env
gtkorvo-dill
gtkorvo-enet
gtkplus
gts
guidance
guile
h5hut
h5part
h5utils
h5z-zfp
hacckernels
hadoop
hapcut2
haploview
harfbuzz
harminv
hdf
hdf5
hdf5-blosc
help2man
hepmc
heppdt
highfive
highwayhash
hisat2
hmmer
hoomd-blue
hpccg
hpctoolkit
hpctoolkit-externals
hpgmg
hpl
hpx
hpx5
hsakmt
hstr
htop
htslib
httpie
hub
hunspell
hwloc
hybpiper
hydra
hypre
ibmisc
iceauth
icedtea
icet
ico
icu4c
id3lib
idba
igraph
ilmbase
image-magick
imake
impute2
infernal
inputproto
intel
intel-daal
intel-gpu-tools
intel-ipp
intel-mkl
intel-mpi
intel-parallel-studio
intel-tbb
intltool
ior
iozone
ipopt
isaac
isaac-server
isl
itstool
itsx
jags
jansson
jasper
jdk
jellyfish
jemalloc
jmol
jq
json-c
json-cwx
json-glib
jsoncpp
judy
julia
kahip
kaks-calculator
kaldi
kallisto
kbproto
kdiff3
kealib
kentutils
kmergenie
kokkos
kraken
krims
kripke
laghos
lammps
last
latte
launchmon
lazyten
lbann
lbxproxy
lcals
lcms
ldc
ldc-bootstrap
legion
leveldb
lftp
libaec
libaio
libapplewm
libarchive
libassuan
libatomic-ops
libbeagle
libbsd
libbson
libcanberra
libcap
libcerf
libcircle
libconfig
libctl
libdivsufsort
libdmx
libdrm
libdwarf
libedit
libelf
libemos
libepoxy
libevent
libevpath
libfabric
libffi
libffs
libfontenc
libfs
libgcrypt
libgd
libgit2
libgpg-error
libgpuarray
libgtextutils
libharu
libhio
libice
libiconv
libint
libjpeg
libjpeg-turbo
libksba
liblbxutil
libmatheval
libmesh
libmng
libmongoc
libmonitor
libnbc
libogg
liboldx
libpcap
libpciaccess
libpfm4
libpipeline
libpng
libpsl
libpthread-stubs
libquo
libsigsegv
libsm
libsodium
libspatialindex
libsplash
libssh2
libsvm
libszip
libtermkey
libtiff
libtool
libunistring
libunwind
libuuid
libuv
libvorbis
libvterm
libwebsockets
libwindowswm
libx11
libxau
libxaw
libxaw3d
libxc
libxcb
libxcomposite
libxcursor
libxdamage
libxdmcp
libxevie
libxext
libxfixes
libxfont
libxfont2
libxfontcache
libxft
libxi
libxinerama
libxkbfile
libxkbui
libxml2
libxmu
libxp
libxpm
libxpresent
libxprintapputil
libxprintutil
libxrandr
libxrender
libxres
libxscrnsaver
libxshmfence
libxslt
libxsmm
libxstream
libxt
libxtrap
libxtst
libxv
libxvmc
libxxf86dga
libxxf86misc
libxxf86vm
libyogrt
libzip
likwid
linkphase3
linux-headers
listres
llvm
llvm-lld
llvm-openmp-ompt
lmdb
lmod
lndir
log4cxx
lrslib
lrzip
lua
lua-bitlib
lua-jit
lua-lpeg
lua-luafilesystem
lua-luaposix
lua-mpack
luit
lulesh
lwgrp
lwm2
lz4
lzma
lzo
m4
macsio
mad-numdiff
mafft
magics
magma
makedepend
mallocmc
man-db
mariadb
masa
masurca	masurca: new package (#6386)	2017-11-20 21:51:35 -07:00
matio
matlab
maven
maverick
mawk
mbedtls
mcl
mdtest
meep
memaxes
meme	meme: add version 4.12.0 (#6388)	2017-11-20 21:50:46 -07:00
meraculous
mercurial
mesa
mesa-glu
meshkit
meson
mesquite
metaphysicl
metis
mfem
microbiomeutil
miniaero
miniamr
miniconda2
miniconda3
minife
minighost
minigmg
minimap2
minimd
minismac2d
minitri
minixyce
mira	mira: new package (#6385)	2017-11-21 08:04:08 -07:00
mirdeep
mitofates
mitos
mkfontdir
mkfontscale
mlhka
moab
molcas
mono
mosh
mothur
motioncor2
mozjs
mpc
mpe2
mpest
mpfr
mpibash
mpiblast
mpich
mpifileutils
mpileaks
mpip
mpir
mpix-launch-swift
mrbayes
mrnet
mrtrix3
msgpack-c
mshadow
multitail
multiverso
mummer
mumps
munge
muparser
muscle
muse
muster
mvapich2
mxml
mxnet
nag
nalu
namd
nano
nanoflann
nasm
nauty
ncbi-rmblastn
nccl
nccmp
ncdu
ncftp
ncl
nco
ncurses
ncview
ndiff
nekbone
neovim
netcdf
netcdf-cxx
netcdf-cxx4
netcdf-fortran
netgauge
netgen
netlib-lapack
netlib-scalapack
nettle
nextflow
nfft
nghttp2
nginx
ngmlr
ninja
ninja-fortran
nmap
nnvm
node-js
notmuch
npb
npm
npth
nspr
numactl
numdiff
nut
nwchem
ocaml
oce
oclock
octave
octave-splines
octopus
of-adios-write
ompss
ompt-openmp
oniguruma
ont-albacore
opari2
openbabel
openblas
opencoarrays
opencv
openexr
openfast
openfoam-com
openfoam-org
openfst
openjpeg
openmc
openmpi
openscenegraph
openspeedshop
openssh
openssl
opium
opus
orfm
orthomcl
osu-micro-benchmarks
otf
otf2
p4est
p7zip
pacbio-daligner
pacbio-damasker
pacbio-dazz-db
pacbio-dextractor
pagit
pagmo
paml
panda
pango
papi
paradiseo
parallel
parallel-netcdf	Using MPI environment compiler variables for pnetcdf. (#6424)	2017-11-22 21:34:21 -08:00
paraver
paraview
parmetis
parmgridgen
parsimonator
parsplice
partitionfinder
patch
patchelf
pathfinder
pax-utils
pbmpi
pcma
pcre
pcre2
pdsh
pdt
pegtl
pennant
perl
perl-algorithm-diff
perl-b-hooks-endofscope
perl-bio-perl
perl-capture-tiny
perl-class-data-inheritable
perl-class-load
perl-class-load-xs
perl-cpan-meta-check
perl-data-optlist
perl-data-stag
perl-dbfile
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-dist-checkconflicts
perl-eval-closure
perl-exception-class
perl-extutils-makemaker
perl-extutils-pkgconfig
perl-file-pushd
perl-font-ttf
perl-gd
perl-gd-graph
perl-gd-text
perl-intervaltree
perl-io-string
perl-log-log4perl
perl-math-cdf
perl-module-build
perl-module-runtime-conflicts
perl-moose
perl-mro-compat
perl-namespace-clean
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-params-util
perl-pdf-api2
perl-star-fusion
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-uplevel
perl-term-readkey
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-most
perl-test-needs
perl-test-requires
perl-test-warn
perl-test-warnings
perl-text-diff
perl-uri-escape
perl-xml-parser
petsc
pexsi
pfft
pflotran
pgdspider
pgi
phantompeakqualtools	phantompeakqualtools: new package (#6403)	2017-11-21 15:58:20 -07:00
phasta
phylip
picard
pidx
pigz
piranha
pixman
pkg-config
pkgconf
planck-likelihood
plasma
plink
plumed
pmgr-collective
pmix
pnfft
pngwriter
poamsa
pocl	Fix to allow installing pocl 0.14 again (#6372)	2017-11-21 08:03:36 -07:00
polymake
porta
portage
postgresql
ppl
prank
presentproto
preseq
price
primer3
printproto
probconsrna
proj
protobuf
proxymngr
pruners-ninja
ps-lite
psi4
pstreams
pugixml
pumi
pvm
py-3to2
py-4suite-xml
py-abipy
py-alabaster
py-apache-libcloud
py-apipkg
py-appdirs
py-appnope
py-apscheduler
py-argcomplete
py-argparse
py-ase
py-asn1crypto
py-astroid
py-astropy
py-attrs
py-autopep8
py-babel
py-backports-abc
py-backports-shutil-get-terminal-size
py-backports-ssl-match-hostname
py-basemap
py-beautifulsoup4
py-binwalk
py-biom-format
py-biopython	py-biopython: add version 1.70 (#6389)	2017-11-20 21:50:25 -07:00
py-bleach
py-blessings
py-bokeh
py-boltons
py-bottleneck
py-brian
py-brian2	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
py-bsddb3
py-cclib
py-cdat-lite
py-cdo
py-certifi
py-cffi
py-chardet
py-click
py-colorama
py-colormath
py-configparser
py-counter
py-coverage
py-cpuinfo
py-cryptography
py-csvkit
py-current
py-cutadapt
py-cycler
py-cython
py-dask
py-dateutil
py-dbf
py-decorator
py-deeptools
py-dev
py-dill
py-dlcpar
py-docutils
py-doxypy
py-doxypypy
py-dryscrape
py-dxchange
py-dxfile
py-easybuild-easyblocks
py-easybuild-easyconfigs
py-easybuild-framework
py-edffile
py-elasticsearch
py-elephant	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
py-emcee
py-entrypoints
py-enum34
py-epydoc
py-espresso
py-espressopp
py-et-xmlfile
py-execnet
py-fastaindex
py-fasteners
py-faststructure
py-fiscalyear
py-flake8
py-flask
py-flexx
py-funcsigs
py-functools32
py-future
py-futures
py-genders
py-genshi
py-git2
py-git-review
py-gnuplot
py-griddataformats
py-guidata
py-guiqwt
py-h5py
py-html2text
py-html5lib
py-httpbin
py-hypothesis
py-idna
py-igraph
py-imagesize
py-iminuit
py-importlib
py-ipaddress
py-ipdb
py-ipykernel
py-ipython
py-ipython-genutils
py-ipywidgets
py-itsdangerous
py-jdcal
py-jedi
py-jinja2
py-joblib
py-jpype
py-jsonschema
py-junit-xml
py-jupyter-client
py-jupyter-console
py-jupyter-core
py-jupyter-notebook
py-keras
py-latexcodec
py-lazy
py-lazyarray
py-libconf
py-line-profiler
py-lit
py-llvmlite
py-lmfit
py-lockfile
py-logilab-common
py-lxml
py-lzstring
py-macholib
py-machotools
py-macs2
py-mako
py-mappy
py-markdown
py-markupsafe
py-matplotlib
py-mccabe
py-mdanalysis
py-meep
py-memory-profiler
py-methylcode
py-misopy
py-mistune
py-mock
py-mongo
py-monotonic
py-monty
py-mpi4py
py-mpmath
py-multiprocess
py-multiqc
py-mx
py-mxnet
py-myhdl
py-mysqldb1
py-nbconvert
py-nbformat
py-neo
py-nestle
py-netcdf4
py-netifaces
py-networkx
py-nose
py-nosexcover
py-numba
py-numexpr
py-numpy
py-numpydoc
py-olefile
py-ont-fast5-api
py-openpyxl
py-ordereddict
py-oset
py-packaging
py-palettable
py-pandas
py-paramiko
py-pathlib2
py-pathos
py-pathspec
py-patsy
py-pbr
py-periodictable
py-petsc4py
py-pexpect
py-phonopy
py-pickleshare
py-pil
py-pillow
py-pip
py-pipits
py-pkgconfig
py-ply
py-pmw
py-pox
py-ppft
py-prettytable
py-proj
py-prompt-toolkit
py-protobuf
py-psutil
py-ptyprocess
py-pudb
py-py
py-py2bit
py-py2cairo
py-py2neo
py-py4j
py-pyasn1
py-pybigwig
py-pybind11
py-pybtex
py-pybtex-docutils
py-pychecker
py-pycodestyle
py-pycparser
py-pycrypto
py-pycurl
py-pydatalog
py-pydispatcher
py-pydot
py-pyelftools
py-pyfasta
py-pyfftw
py-pyflakes
py-pygments
py-pygobject
py-pygtk
py-pylint
py-pymatgen
py-pyminifier
py-pympler
py-pynn
py-pypar
py-pyparsing
py-pypeflow
py-pyprof2html
py-pyqt
py-pyrad
py-pysam	py-pysam: add version 0.13 (#6382)	2017-11-20 14:08:25 -07:00
py-pyscaf
py-pyserial
py-pyside
py-pysocks
py-pytables
py-pytest
py-pytest-cov
py-pytest-flake8
py-pytest-httpbin
py-pytest-mock
py-pytest-runner
py-pytest-xdist
py-python-daemon
py-python-gitlab
py-pythonqwt	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
py-pytz
py-pywavelets
py-pyyaml
py-qtawesome
py-qtconsole	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
py-qtpy
py-quantities
py-radical-utils
py-ranger
py-readme-renderer
py-regex
py-requests
py-restview
py-rope
py-rpy2
py-rsa
py-rtree
py-saga-python
py-scientificpython
py-scikit-image
py-scikit-learn
py-scipy
py-seaborn
py-setuptools
py-sh
py-shiboken
py-simplegeneric
py-simplejson
py-singledispatch
py-sip
py-six
py-slepc4py
py-sncosmo
py-snowballstemmer
py-spectra
py-spefile
py-spglib
py-sphinx
py-sphinx-bootstrap-theme
py-sphinx-rtd-theme
py-sphinxcontrib-bibtex
py-sphinxcontrib-programoutput
py-sphinxcontrib-websupport
py-spyder
py-spykeutils
py-sqlalchemy
py-statsmodels
py-storm
py-subprocess32
py-symengine
py-symfit
py-sympy
py-tabulate
py-tappy
py-terminado
py-theano
py-tifffile
py-tomopy
py-tornado
py-tqdm
py-traitlets
py-tuiview
py-twisted
py-typing
py-tzlocal
py-unittest2
py-unittest2py3k
py-urllib3
py-urwid
py-vcversioner
py-virtualenv
py-vsc-base
py-vsc-install
py-wcsaxes
py-wcwidth
py-webkit-server
py-werkzeug
py-wheel
py-widgetsnbextension
py-wrapt
py-xarray
py-xlrd
py-xlsxwriter
py-xmlrunner
py-xopen
py-xpyb
py-xvfbwrapper
py-yapf
py-yt	py-yt: Yt-project is moved. Add new version. (#6409)	2017-11-23 07:25:35 +01:00
py-zmq
python
qbank
qbox
qhull
qmcpack
qmd-progress
qrupdate
qt
qt-creator
qtgraph
qthreads
quinoa
qwt
r
r-a4
r-a4base
r-a4classif
r-a4core
r-a4preproc
r-a4reporting
r-abadata
r-abaenrichment
r-abind
r-absseq
r-acde
r-acepack
r-acgh
r-acme
r-ada
r-adabag
r-ade4
r-adegenet
r-adsplit
r-affxparser
r-affy
r-affycomp
r-affycompatible
r-affycontam
r-affycoretools
r-affydata
r-affyexpress
r-affyilm
r-affyio
r-affypdnn
r-affyplm
r-affyqcreport
r-affyrnadegradation
r-agdex
r-agilp
r-agimicrorna
r-aims
r-aldex2
r-allelicimbalance
r-alpine
r-als
r-alsace
r-altcdfenvs
r-ampliqueso
r-analysispageserver
r-anaquin
r-aneufinder
r-aneufinderdata
r-annaffy
r-annotate
r-annotationdbi
r-annotationfilter
r-annotationforge
r-annotationhub
r-ape
r-assertthat
r-backports
r-bamsignals
r-base64
r-base64enc
r-beanplot
r-bh
r-bindr
r-bindrcpp
r-biobase
r-biocgenerics
r-biocinstaller
r-biocparallel
r-biomart
r-biostrings
r-biovizbase
r-bit
r-bit64
r-bitops
r-blob
r-boot
r-brew
r-broom	r-broom: new package (#6282)	2017-11-21 10:49:09 +01:00
r-bsgenome
r-bumphunter
r-c50
r-callr
r-car
r-caret
r-category
r-catools
r-cellranger
r-checkmate
r-checkpoint
r-chemometrics	r-chemometrics: Create new package (#6379)	2017-11-20 11:56:33 -07:00
r-chron
r-circlize
r-class
r-clipr
r-cluster
r-clusterprofiler
r-coda
r-codetools
r-coin
r-colorspace
r-complexheatmap
r-corpcor
r-corrplot
r-covr
r-cowplot
r-crayon
r-crosstalk	r-crosstalk: Create new package (#6383)	2017-11-20 21:52:58 -07:00
r-cubature
r-cubist
r-curl
r-data-table
r-dbi
r-dbplyr
r-delayedarray
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-deseq
r-deseq2
r-desolve
r-devtools
r-diagrammer
r-dichromat
r-diffusionmap	r-diffusionmap: Create new package (#6378)	2017-11-20 11:56:47 -07:00
r-digest
r-diptest
r-dnacopy
r-do-db
r-domc
r-doparallel
r-dorng
r-dose
r-downloader
r-dplyr	r-broom: new package (#6282)	2017-11-21 10:49:09 +01:00
r-dt
r-dtw
r-dygraphs
r-e1071
r-edger
r-ellipse
r-ensembldb
r-ergm
r-evaluate
r-expm
r-factoextra
r-factominer
r-ff
r-fgsea
r-filehash
r-flashclust
r-flexmix
r-fnn	r-fnn: Create new package (#6384)	2017-11-20 21:52:39 -07:00
r-forcats
r-foreach
r-forecast
r-foreign
r-formatr
r-formula
r-fpc
r-fracdiff
r-futile-logger
r-futile-options
r-gbm
r-gcrma
r-gdata
r-geiger
r-genefilter
r-geneplotter
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-geomorph
r-geoquery
r-geosphere
r-getoptlong
r-ggally
r-ggbio
r-ggdendro
r-ggjoy	r-ggjoy: Create new package (#6399)	2017-11-21 13:44:25 -07:00
r-ggmap
r-ggplot2
r-ggpubr
r-ggrepel
r-ggridges	r-ggridges: Create new package (#6376)	2017-11-20 14:18:16 -07:00
r-ggsci
r-ggvis
r-gistr
r-git2r
r-glmnet
r-globaloptions
r-glue
r-gmodels
r-gmp
r-go-db
r-googlevis
r-gosemsim
r-gostats
r-gplots
r-graph
r-gridbase
r-gridextra
r-gseabase
r-gsubfn
r-gtable
r-gtools
r-gtrellis
r-gviz
r-haven	r-haven: created new package (#6293)	2017-11-21 09:54:43 +01:00
r-hexbin
r-highr
r-hmisc
r-hms
r-htmltable
r-htmltools
r-htmlwidgets
r-httpuv
r-httr
r-hwriter
r-hypergraph
r-ica	r-ica: Create new package (#6400)	2017-11-21 13:43:02 -07:00
r-igraph
r-illuminaio
r-impute
r-influencer
r-inline
r-interactivedisplaybase
r-ipred
r-iranges
r-irdisplay
r-irkernel
r-irlba
r-iso
r-iterators
r-janitor
r-jpeg
r-jsonlite
r-kegg-db
r-keggrest
r-kernlab
r-kernsmooth
r-kknn
r-knitr
r-labeling
r-lambda-r
r-laplacesdemon
r-lattice
r-latticeextra
r-lava
r-lazyeval
r-leaflet
r-leaps
r-learnbayes
r-limma
r-lme4
r-lmtest
r-locfit
r-log4r
r-lpsolve
r-lsei
r-lubridate
r-magic
r-magrittr
r-makecdfenv
r-maldiquant
r-mapproj
r-maps
r-maptools
r-markdown
r-mass
r-matrix
r-matrixmodels
r-matrixstats
r-mclust
r-mcmcglmm
r-mda
r-memoise
r-mergemaid
r-methodss3
r-mgcv
r-mime
r-minfi
r-minqa
r-mlbench
r-mlinterfaces
r-mnormt
r-modelmetrics
r-modelr	r-modelr: created new package (#6289)	2017-11-21 09:26:44 +01:00
r-modeltools
r-mpm
r-msnbase
r-multcomp
r-multtest
r-munsell
r-mvtnorm
r-mzid
r-mzr
r-ncbit
r-ncdf4
r-network
r-networkd3
r-nlme
r-nloptr
r-nmf
r-nnet
r-nnls
r-nor1mix
r-np
r-numderiv
r-oligoclasses
r-oo
r-openssl
r-organismdbi
r-packrat
r-pacman
r-pamr
r-party
r-partykit
r-pbapply	r-pbapply: Create new package (#6377)	2017-11-21 13:45:12 -07:00
r-pbdzmq
r-pbkrtest
r-pcamethods
r-permute
r-pfam-db
r-phantompeakqualtools	phantompeakqualtools: new package (#6403)	2017-11-21 15:58:20 -07:00
r-pkgconfig
r-pkgmaker
r-plogr
r-plotrix
r-pls
r-plyr
r-pmcmr
r-png
r-prabclus
r-praise
r-preprocesscore
r-prettyunits
r-prodlim
r-progress
r-protgenerics
r-proto
r-proxy
r-pryr
r-psych	r-psych: created new package (#6286)	2017-11-21 09:40:10 +01:00
r-ptw
r-purrr
r-quadprog
r-quantmod
r-quantreg
r-quantro
r-qvalue
r-r6
r-randomforest
r-raster
r-rbgl
r-rbokeh
r-rcolorbrewer
r-rcpp
r-rcpparmadillo
r-rcppeigen
r-rcppprogress	r-cppprogress: Create new package (#6398)	2017-11-21 13:42:44 -07:00
r-rcurl
r-rda
r-readr
r-readxl
r-registry
r-rematch
r-reordercluster
r-reportingtools
r-repr
r-reprex
r-reshape
r-reshape2
r-rex
r-rgl
r-rgooglemaps
r-rhdf5
r-rhtslib
r-rinside
r-rjava
r-rjson
r-rjsonio
r-rlang
r-rmarkdown
r-rminer
r-rmpfr
r-rmpi
r-rmysql
r-rngtools
r-robustbase
r-rocr
r-rodbc
r-roxygen2
r-rpart
r-rpart-plot
r-rpostgresql
r-rsamtools
r-rsnns
r-rsqlite
r-rstan
r-rstudioapi
r-rtracklayer
r-rvcheck
r-rvest
r-rzmq
r-s4vectors
r-samr
r-sandwich
r-scales
r-scatterplot3d
r-sdmtools	r-sdmtools: Create new package (#6397)	2017-11-21 13:42:28 -07:00
r-segmented
r-selectr
r-seqinr
r-sfsmisc
r-shape
r-shiny
r-shortread
r-siggenes
r-simpleaffy
r-snow
r-som
r-somaticsignatures
r-sourcetools
r-sp
r-sparsem
r-spdep
r-speedglm
r-sqldf
r-stanheaders
r-statmod
r-statnet-common
r-stringi
r-stringr
r-strucchange
r-subplex
r-summarizedexperiment
r-survey
r-survival
r-sva
r-tarifx
r-tclust	r-tclust: Create new package (#6380)	2017-11-20 11:57:04 -07:00
r-tensora
r-testit
r-testthat
r-th-data
r-threejs
r-tibble
r-tidyr
r-tiff
r-timedate
r-trimcluster
r-trust
r-tseries
r-ttr
r-utils
r-uuid
r-variantannotation
r-varselrf
r-vcd
r-vegan
r-vgam
r-viridis
r-viridislite
r-visnetwork
r-vsn
r-whisker
r-withr
r-xde
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge
r-xml
r-xml2
r-xtable
r-xts
r-xvector
r-yaml
r-yapsa
r-yaqcaffy
r-yarn
r-zlibbioc
r-zoo
raft
raja
randfold
random123
randrproto
ravel
raxml
ray
rdp-classifier
readline
recordproto
redundans
relion
rempi
rename
rendercheck
renderproto
repeatmasker
resourceproto
revbayes
rgb
rhash
rlwrap
rockstar
root
rose
rr
rsbench
rsem
rstart
rsync
rtags
rtax
ruby
rust
rust-bindgen
sabre
salmon
sambamba
samrai
samtools
sandbox
sas
satsuma2
savanna
saws
sbt
scala
scalasca
scalpel
scons
scorec-core
scorep
scotch
scr
screen
scripts
scrnsaverproto
sctk
sdl2
sdl2-image
sed
seqprep
seqtk
serf
sessreg
setxkbmap
sga
shapeit
shared-mime-info
shiny-server
shortstack
showfont
sickle
siesta
signalp
silo
simplemoc
simul
simulationio
singularity
slepc
slurm
smalt
smc
smproxy
snakemake
snap
snap-berkeley
snap-korf
snappy
snbone
sniffles
snptest
soap2
soapindel
soapsnp
somatic-sniper
sortmerna
sosflow
sowing
sox
spades
spark
sparsehash
sparta
spdlog
spectrum-mpi
speex
sph2pipe
spherepack
spindle
spot
sqlite
squid
sra-toolkit
sspace-longread
sspace-standard
sst-dumpi
sst-macro
stacks
staden-io-lib
star
star-ccm-plus	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
stat
stc
stream
strelka
stress
stringtie
structure
sublime-text
subread
subversion
suite-sparse
sumaclust
sundials
superlu
superlu-dist
superlu-mt
sw4lite
swarm
swfft
swiftsim
swig
symengine
sympol
sz
tabix
talloc
tar
targetp
task
taskd
tassel
tau
tcl
tcoffee
tcsh
tealeaf
tetgen
tethex
texinfo
texlive
the-platinum-searcher
the-silver-searcher
thrift
thrust
tig
tinyxml
tinyxml2
tk
tmalign
tmhmm
tmux
tmuxinator
tophat
tppred
transabyss
transdecoder
transposome
transset
trapproto
tree
trf
triangle
trilinos
trimgalore
trimmomatic
turbine
turbomole
tut
twm
tycho2
typhonio	Changed every docs variant into doc as decided in #2663 (#6412)	2017-11-22 15:06:59 +01:00
uberftp
ucx
udunits2
ufo-core
ufo-filters
uncrustify
unibilium
unison
units
unixodbc
usearch
util-linux
util-macros
uuid
valgrind
vampirtrace
vardictjava
varscan
vc
vcftools
vcsh
vdt
vecgeom
veclibfort
vegas2
velvet
videoproto
viennarna
viewres
vim
virtualgl
visit
vizglow
vmatch
voropp
votca-csg
votca-ctp
votca-moo
votca-tools
votca-xtp
vpfft
vpic
vsearch
vtk
vtkh
vtkm
wannier90
wget
windowswmproto
wt
wx
wxpropgrid
x11perf
xapian-core
xauth
xbacklight
xbiff
xbitmaps
xcalc
xcb-demo
xcb-proto
xcb-util
xcb-util-cursor
xcb-util-errors
xcb-util-image
xcb-util-keysyms
xcb-util-renderutil
xcb-util-wm
xclip
xclipboard
xclock
xcmiscproto
xcmsdb
xcompmgr
xconsole
xcursor-themes
xcursorgen
xdbedizzy
xditview
xdm
xdpyinfo
xdriinfo
xedit
xerces-c
xev
xextproto
xeyes
xf86bigfontproto
xf86dga
xf86dgaproto
xf86driproto
xf86miscproto
xf86rushproto
xf86vidmodeproto
xfd
xfindproxy
xfontsel
xfs
xfsinfo
xfwp
xgamma
xgc
xhost
xineramaproto
xinit
xinput
xkbcomp
xkbdata
xkbevd
xkbprint
xkbutils
xkeyboard-config
xkill
xload
xlogo
xlsatoms
xlsclients
xlsfonts
xmag
xman
xmessage
xmh
xmlto
xmodmap
xmore
xorg-cf-files
xorg-docs
xorg-gtest
xorg-server
xorg-sgml-doctools
xphelloworld
xplor-nih
xplsprinters
xpr
xprehashprinterlist
xprop
xproto
xproxymanagementprotocol
xqilla
xrandr
xrdb
xrefresh
xrootd
xrx
xsbench
xscope
xsdk
xsdktrilinos
xset
xsetmode
xsetpointer
xsetroot
xsimd
xsm
xstdcmap
xtensor
xterm
xtl
xtrans
xtrap
xts
xvidtune
xvinfo
xwd
xwininfo
xwud
xz
yajl
yaml-cpp
yasm
yorick
z3
zeromq
zfp
zip
zlib
zoltan
zsh
zstd