31 lines
1012 B
Python
31 lines
1012 B
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Orthomcl(Package):
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"""OrthoMCL is a genome-scale algorithm for grouping orthologous protein
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sequences."""
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homepage = "http://orthomcl.org/orthomcl/"
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url = "http://orthomcl.org/common/downloads/software/v2.0/orthomclSoftware-v2.0.9.tar.gz"
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version('2.0.9', sha256='5f96d23ff255778535c4926d75b19f059db0c01be1ac599289d2431115d68640')
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depends_on('perl', type=('build', 'run'))
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depends_on('blast-plus')
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depends_on('mcl')
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depends_on('mariadb')
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def install(self, spec, prefix):
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install_tree('bin', prefix.bin)
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install_tree('config', prefix.config)
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install_tree('doc', prefix.doc)
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install_tree('lib', prefix.lib)
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def setup_run_environment(self, env):
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env.prepend_path('PERL5LIB', self.prefix.lib)
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