24 lines
929 B
Python
24 lines
929 B
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RAffyrnadegradation(RPackage):
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"""The package helps with the assessment and correction of
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RNA degradation effects in Affymetrix 3' expression arrays.
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The parameter d gives a robust and accurate measure of RNA
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integrity. The correction removes the probe positional bias,
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and thus improves comparability of samples that are affected
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by RNA degradation."""
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homepage = "https://www.bioconductor.org/packages/AffyRNADegradation/"
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git = "https://git.bioconductor.org/packages/AffyRNADegradation.git"
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version('1.22.0', commit='0fa78f8286494711a239ded0ba587b0de47c15d3')
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depends_on('r@3.4.0:3.4.9', when='@1.22.0')
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depends_on('r-affy', type=('build', 'run'))
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