eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
27 lines
850 B
Python
27 lines
850 B
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Rsem(MakefilePackage):
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"""RSEM is a software package for estimating gene and isoform expression
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levels from RNA-Seq data."""
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homepage = "http://deweylab.github.io/RSEM/"
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url = "https://github.com/deweylab/RSEM/archive/v1.3.0.tar.gz"
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version('1.3.0', '273fd755e23d349cc38a079b81bb03b6')
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depends_on('r', type=('build', 'run'))
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depends_on('perl', type=('build', 'run'))
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depends_on('python', type=('build', 'run'))
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depends_on('bowtie')
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depends_on('bowtie2')
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depends_on('star')
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def install(self, spec, prefix):
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make('install', 'DESTDIR=%s' % prefix, 'prefix=')
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