25 lines
1.0 KiB
Python
25 lines
1.0 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyCrossmap(PythonPackage, SourceforgePackage):
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"""CrossMap is a program for convenient conversion of genome coordinates
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(or annotation files) between different assemblies"""
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homepage = "http://crossmap.sourceforge.net/"
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sourceforge_mirror_path = "crossmap/CrossMap-0.3.3.tar.gz"
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version("0.3.9", sha256="e20a4653e9fc313ac0f5a6cfc37b42e83c3cf2b42f9483706cfb9ec9ff72c74c")
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version("0.3.3", sha256="56d99fd606e13e399b83438953d0d89fc281df1c1e8e47eed7d773e7ec9c88f8")
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depends_on("python@3:", type=("build", "run"))
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depends_on("py-setuptools", type="build")
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depends_on("py-cython@0.17:", type=("build", "run"))
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depends_on("py-pysam", type=("build", "run"))
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depends_on("py-bx-python", type=("build", "run"))
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depends_on("py-pybigwig", type=("build", "run"))
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