33 lines
1.4 KiB
Python
33 lines
1.4 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RAims(RPackage):
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"""Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype.
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This package contains the AIMS implementation. It contains necessary
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functions to assign the five intrinsic molecular subtypes (Luminal A,
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Luminal B, Her2-enriched, Basal-like, Normal-like). Assignments could be
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done on individual samples as well as on dataset of gene expression
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data."""
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bioc = "AIMS"
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version("1.30.0", commit="2ab61159c5aa0902cc33fc1502f7853b66912cce")
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version("1.28.0", commit="84608df638b5694c08158ed77ad2c8a64c4e594b")
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version("1.26.0", commit="5dcf60eb4cdcf563ea848482c9c488f465c27bbd")
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version("1.22.0", commit="34a38978b24377abb864eff7683bb36344ff171d")
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version("1.16.0", commit="86cb8c998ade3003cd34a5405b218ae07d97bf84")
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version("1.14.1", commit="4125c4217a7e4f00169b5ba65dcc3778fdd33c6f")
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version("1.12.0", commit="d7eaa723d19a6aca37df244fd0b3d5426ed0a626")
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version("1.10.0", commit="972945980b39168502a02ac3aa396f9b99fb3d71")
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version("1.8.0", commit="86b866c20e191047492c51b43e3f73082c3f8357")
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depends_on("r@2.10:", type=("build", "run"))
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depends_on("r-e1071", type=("build", "run"))
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depends_on("r-biobase", type=("build", "run"))
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