spack/var/spack/repos/builtin/packages/interproscan/large-gid.patch
Glenn Johnson dd626a0f07 interproscan package: add version 4.8, patch for version 5 (#12897)
This PR adds interproscan-4.8, which has a completely different build
system than version 5. Note that this builds for running on a host as
opposed to a queue system. I am fairly certain that a queue system can
be configured later.

This PR also adds a patch for intrproscan-5 to build when the user
building the packages has a large GID by setting posix mode for tar.
2019-09-25 19:04:57 -07:00

23 lines
1.1 KiB
Diff

diff -ruN a/core/jms-implementation/pom.xml b/core/jms-implementation/pom.xml
--- a/core/jms-implementation/pom.xml 2019-07-03 04:17:42.000000000 -0500
+++ b/core/jms-implementation/pom.xml 2019-09-21 10:20:42.710868269 -0500
@@ -275,6 +275,7 @@
<descriptors>
<descriptor>assembly.xml</descriptor>
</descriptors>
+ <tarLongFileMode>posix</tarLongFileMode>
<finalName>interproscan-5</finalName>
</configuration>
<executions>
diff -ruN a/core/precalcmatches/berkeley/pom.xml b/core/precalcmatches/berkeley/pom.xml
--- a/core/precalcmatches/berkeley/pom.xml 2019-07-03 04:17:42.000000000 -0500
+++ b/core/precalcmatches/berkeley/pom.xml 2019-09-21 10:21:16.874804845 -0500
@@ -41,6 +41,7 @@
<descriptors>
<descriptor>assembly.xml</descriptor>
</descriptors>
+ <tarLongFileMode>posix</tarLongFileMode>
<finalName>berkeley-db-builder</finalName>
</configuration>
<executions>