a8ccb8e116
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
35 lines
1.3 KiB
Python
35 lines
1.3 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
|
|
from spack import *
|
|
|
|
|
|
class PacbioDazzDb(MakefilePackage):
|
|
"""The Dazzler Database Library. This version is a special fork
|
|
required for some pacbio utilities."""
|
|
|
|
homepage = "https://github.com/PacificBiosciences/DAZZ_DB"
|
|
git = "https://github.com/PacificBiosciences/DAZZ_DB.git"
|
|
|
|
version('2017-04-10', commit='f29d27d51f460563481cd227d17f4bdc5e288365')
|
|
|
|
depends_on('gmake', type='build')
|
|
|
|
def edit(self, spec, prefix):
|
|
mkdirp(prefix.bin)
|
|
mkdirp(prefix.lib)
|
|
mkdirp(prefix.include)
|
|
makefile = FileFilter('Makefile')
|
|
makefile.filter(r'DEST_DIR\s*=\s*~/bin', 'DEST_DIR = ' + prefix.bin)
|
|
gmf = FileFilter('GNUmakefile')
|
|
gmf.filter(r'rsync\s*-av\s*\$\{ALL\}\s*\$\{PREFIX\}/bin',
|
|
'cp ${ALL} ' + prefix.bin)
|
|
gmf.filter(r'rsync\s*-av\s*libdazzdb.*\s*\$\{PREFIX\}/lib',
|
|
'cp libdazzdb.* ' + prefix.lib)
|
|
gmf.filter((r'rsync\s*-av\s*\$\(wildcard\s*\$\{THISDIR\}/\*.h'
|
|
r'\)\s*\$\{PREFIX\}/include'),
|
|
'cp *.h ' + prefix.include)
|