31 lines
1.3 KiB
Python
31 lines
1.3 KiB
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack.package import *
|
|
|
|
|
|
class RSiggenes(RPackage):
|
|
"""Multiple Testing using SAM and Efron's Empirical Bayes Approaches.
|
|
|
|
Identification of differentially expressed genes and estimation of the
|
|
False Discovery Rate (FDR) using both the Significance Analysis of
|
|
Microarrays (SAM) and the Empirical Bayes Analyses of Microarrays
|
|
(EBAM)."""
|
|
|
|
bioc = "siggenes"
|
|
|
|
version('1.70.0', commit='c263daa14cf87c61b41e3a9e88573ba339c66179')
|
|
version('1.68.0', commit='a29bf02b19cc9003c8401608831232b7c2af26e7')
|
|
version('1.64.0', commit='3b528d37c16fc41bbc5c98165f606394313aa050')
|
|
version('1.58.0', commit='69500158d69942cf7c62f583830933cf8baf89a1')
|
|
version('1.56.0', commit='3e929feaa76311be07ff51ad807e657b0b521f6f')
|
|
version('1.54.0', commit='1630e42652192e3e4e48e9e78e53665a120cfc7f')
|
|
version('1.52.0', commit='dc46cf4b6053ea99c6c841d661f97390653c2e71')
|
|
version('1.50.0', commit='b1818f26e1449005ffd971df6bda8da0303080bc')
|
|
|
|
depends_on('r-biobase', type=('build', 'run'))
|
|
depends_on('r-multtest', type=('build', 'run'))
|
|
depends_on('r-scrime@1.2.5:', type=('build', 'run'), when='@1.58.0:')
|