7da4b3569f
* py-bluepyemodel: new package with dependencies
* py-morphio: add MPI as dependency to avoid failing builds
* Formatting
* py-bluepyefe: no need to set NEURON_INIT_MPI
* py-morphio: unifurcation branch is ancient history
* py-bluepyopt: only set NEURON_INIT_MPI with +neuron
* py-efel: get rid of old version
* py-morph{-tool,io}: rename develop to master to match branch
* py-bluepyefe: unset PMI_RANK is also neuron-related
* py-bluepyopt: PMI_RANK is also neuron-related
* Implement review remarks
* py-morph-tool, py-neurom: small fixes
* py-morphio: reword dependencies
38 lines
1.5 KiB
Python
38 lines
1.5 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyBluepyopt(PythonPackage):
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"""Bluebrain Python Optimisation Library"""
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homepage = "https://github.com/BlueBrain/BluePyOpt"
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pypi = "bluepyopt/bluepyopt-1.9.27.tar.gz"
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# NOTE : while adding new release check pmi_rank.patch compatibility
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version("1.14.4", sha256="7567fd736053250ca06030f67ad93c607b100c2b98df8dc588c26b64cb3e171c")
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# patch required to avoid hpe-mpi linked mechanism library
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patch("pmi_rank.patch")
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variant("scoop", default=False, description="Use BluePyOpt together with py-scoop")
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depends_on("py-setuptools", type="build")
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depends_on("py-numpy@1.6:", type=("build", "run"))
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depends_on("py-pandas@0.18:", type=("build", "run"))
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depends_on("py-deap@1.3.3:", type=("build", "run"))
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depends_on("py-efel@2.13:", type=("build", "run"))
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depends_on("py-ipyparallel", type=("build", "run"))
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depends_on("py-pickleshare@0.7.3:", type=("build", "run"))
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depends_on("py-jinja2@2.8:", type=("build", "run"))
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depends_on("py-future", type=("build", "run"))
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depends_on("py-pebble@4.6:", type=("build", "run"))
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depends_on("py-scoop@0.7:", type=("build", "run"), when="+scoop")
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depends_on("neuron@7.4:", type=("build", "run"))
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def setup_run_environment(self, env):
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env.unset("PMI_RANK")
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env.set("NEURON_INIT_MPI", "0")
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