41 lines
1.5 KiB
Python
41 lines
1.5 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyUcsfPyem(PythonPackage):
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"""UCSF pyem is a collection of Python modules and command-line
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utilities for electron microscopy of biological samples."""
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homepage = "https://github.com/asarnow/pyem"
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git = "https://github.com/asarnow/pyem.git"
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maintainers("dorton21")
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license("GPL-3.0-or-later")
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# Using commit since releases haven't been updated in 2 years
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version("2021-04-07", commit="ed0527f98657d21d887357426b74e5240d477fae")
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depends_on("py-setuptools", type="build")
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depends_on("py-numpy@1.14:", type=("build", "run"))
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depends_on("py-scipy@1.2:", type=("build", "run"))
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depends_on("py-matplotlib@2.2:", type=("build", "run"))
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depends_on("py-future@0.15:", type=("build", "run"))
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depends_on("py-numba@0.41:", type=("build", "run"))
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depends_on("py-seaborn@0.9:", type=("build", "run"))
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depends_on("py-pandas@0.23.4:", type=("build", "run"))
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depends_on("py-pathos@0.2.1:", type=("build", "run"))
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depends_on("py-pyfftw@0.10:", type=("build", "run"))
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depends_on("py-healpy@1.11:", type=("build", "run"))
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depends_on("py-natsort@6.0:", type=("build", "run"))
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# Extracts files into bin for proper useage
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@run_after("install")
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def extraction(self):
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mkdir(self.prefix.bin)
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install("*.py", self.prefix.bin)
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