25 lines
1.0 KiB
Python
25 lines
1.0 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RTfmpvalue(RPackage):
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"""In putative Transcription Factor Binding Sites (TFBSs) identification
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from sequence/alignments, we are interested in the significance of
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certain match score. TFMPvalue provides the accurate calculation of
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P-value with score threshold for Position Weight Matrices, or the score
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with given P-value. This package is an interface to code originally
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made available by Helene Touzet and Jean-Stephane Varre, 2007,
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Algorithms Mol Biol:2, 15."""
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homepage = "https://github.com/ge11232002/TFMPvalue"
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url = "https://cran.rstudio.com/src/contrib/TFMPvalue_0.0.6.tar.gz"
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list_url = "https://cran.rstudio.com/src/contrib/Archive/TFMPvalue"
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version('0.0.6', '69fdf4f9b9a0f408a5cee9ce34bea261')
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depends_on('r-rcpp@0.11.1:', type=('build', 'run'))
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