spack/var/spack/repos/builtin/packages/bowtie2/bowtie2-2.2.5.patch
George Hartzell 9385659aa1 bowtie2: add support for version 2.3.1 (#3599)
* Add support for 2.3.1

Updated digest and added a dependency on tbb.

* Cleanup patch name and add description
2017-03-28 21:35:46 -05:00

17 lines
357 B
Diff

--- Makefile 2015-02-26 10:50:00.000000000 -0800
+++ Makefile.new 2015-07-29 18:03:59.891357399 -0700
@@ -22,10 +22,10 @@
#
INC =
-GCC_PREFIX = $(shell dirname `which gcc`)
+GCC_PREFIX =
GCC_SUFFIX =
-CC = $(GCC_PREFIX)/gcc$(GCC_SUFFIX)
-CPP = $(GCC_PREFIX)/g++$(GCC_SUFFIX)
+CC = cc
+CPP = c++
CXX = $(CPP)
HEADERS = $(wildcard *.h)
BOWTIE_MM = 1