39 lines
1.2 KiB
Python
39 lines
1.2 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Fastqvalidator(MakefilePackage):
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"""The fastQValidator validates the format of fastq files."""
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homepage = "http://genome.sph.umich.edu/wiki/FastQValidator"
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git = "https://github.com/statgen/fastQValidator.git"
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version('2017-01-10', commit='6d619a34749e9d33c34ef0d3e0e87324ca77f320')
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resource(
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name='libStatGen',
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git='https://github.com/statgen/libStatGen.git',
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commit='9db9c23e176a6ce6f421a3c21ccadedca892ac0c'
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)
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depends_on('zlib', type='link')
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patch('chromosome.patch', when='@2017-01-10', working_dir='libStatGen')
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@property
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def build_targets(self):
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return ['LIB_PATH_GENERAL={0}'.format(
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join_path(self.stage.source_path, 'libStatGen'))]
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@property
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def install_targets(self):
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return [
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'INSTALLDIR={0}'.format(self.prefix.bin),
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'LIB_PATH_GENERAL={0}'.format(
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join_path(self.stage.source_path, 'libStatGen')),
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'install'
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]
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