25 lines
1.0 KiB
Python
25 lines
1.0 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Soapdenovo2(MakefilePackage):
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"""SOAPdenovo is a novel short-read assembly method that can build a de
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novo draft assembly for the human-sized genomes. The program is
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specially designed to assemble Illumina GA short reads. It creates
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new opportunities for building reference sequences and carrying out
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accurate analyses of unexplored genomes in a cost effective way."""
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homepage = "https://github.com/aquaskyline/SOAPdenovo2"
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url = "https://github.com/aquaskyline/SOAPdenovo2/archive/r240.tar.gz"
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version('240', sha256='cc9e9f216072c0bbcace5efdead947e1c3f41f09baec5508c7b90f933a090909')
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install('SOAPdenovo-63mer', prefix.bin)
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install('SOAPdenovo-127mer', prefix.bin)
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