
* Update crtm from jcsda/spack-stack-dev * Update grads from jcsda/spack-stack-dev * Update hdf from jcsda/spack-stack-dev * Update ip from jcsda/spack-stack-dev * Update met from jcsda/spack-stack-dev * Update metplus from jcsda/spack-stack-dev * Update py-kiwisolver from jcsda/spack-stack-dev * Update py-pyogrio from jcsda/spack-stack-dev * Update py-ruamel-yaml-clib from jcsda/spack-stack-dev * Update wgrib2 from jcsda/spack-stack-dev
291 lines
10 KiB
Python
291 lines
10 KiB
Python
# Copyright Spack Project Developers. See COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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import re
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import spack.build_systems.cmake
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import spack.build_systems.makefile
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from spack.package import *
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variant_map_common = {
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"netcdf3": "USE_NETCDF3",
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"netcdf4": "USE_NETCDF4",
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"mysql": "USE_MYSQL",
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"udf": "USE_UDF",
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"regex": "USE_REGEX",
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"tigge": "USE_TIGGE",
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"proj4": "USE_PROJ4",
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"aec": "USE_AEC",
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"g2c": "USE_G2CLIB",
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"png": "USE_PNG",
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"jasper": "USE_JASPER",
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"openmp": "USE_OPENMP",
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"wmo_validation": "USE_WMO_VALIDATION",
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"ipolates": "USE_IPOLATES",
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"disable_alarm": "DISABLE_ALARM",
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"fortran_api": "MAKE_FTN_API",
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"disable_stat": "DISABLE_STAT",
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"openjpeg": "USE_OPENJPEG",
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}
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variant_map_makefile = {"spectral": "USE_SPECTRAL"}
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variant_map_cmake = {
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"netcdf": "USE_NETCDF",
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"disable_timezone": "DISABLE_TIMEZONE",
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"enable_docs": "ENABLE_DOCS",
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}
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variant_map_makefile.update(variant_map_common)
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variant_map_cmake.update(variant_map_common)
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class Wgrib2(MakefilePackage, CMakePackage):
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"""Utility for interacting with GRIB2 files"""
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homepage = "https://www.cpc.ncep.noaa.gov/products/wesley/wgrib2"
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url = "https://github.com/NOAA-EMC/wgrib2/archive/refs/tags/v3.5.0.tar.gz"
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git = "https://github.com/NOAA-EMC/wgrib2.git"
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maintainers(
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"AlysonStahl-NOAA", "t-brown", "AlexanderRichert-NOAA", "Hang-Lei-NOAA", "edwardhartnett"
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)
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build_system(
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conditional("cmake", when="@3.2:"), conditional("makefile", when="@:3.1"), default="cmake"
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)
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version("develop", branch="develop")
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version("3.6.0", sha256="55913cb58f2b329759de17f5a84dd97ad1844d7a93956d245ec94f4264d802be")
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version("3.5.0", sha256="b27b48228442a08bddc3d511d0c6335afca47252ae9f0e41ef6948f804afa3a1")
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version("3.4.0", sha256="ecbce2209c09bd63f1bca824f58a60aa89db6762603bda7d7d3fa2148b4a0536")
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version("3.3.0", sha256="010827fba9c31f05807e02375240950927e9e51379e1444388153284f08f58e2")
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version("3.2.0", sha256="ac3ace77a32c2809cbc4538608ad64aabda2c9c1e44e7851da79764a6eb3c369")
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version(
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"3.1.1",
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sha256="9236f6afddad76d868c2cfdf5c4227f5bdda5e85ae40c18bafb37218e49bc04a",
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extension="tar.gz",
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)
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version(
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"3.1.0",
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sha256="5757ef9016b19ae87491918e0853dce2d3616b14f8c42efe3b2f41219c16b78f",
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extension="tar.gz",
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)
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version(
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"2.0.8",
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sha256="5e6a0d6807591aa2a190d35401606f7e903d5485719655aea1c4866cc2828160",
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extension="tar.gz",
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)
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version(
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"2.0.7",
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sha256="d7f1a4f9872922c62b3c7818c022465532cca1f5666b75d3ac5735f0b2747793",
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extension="tar.gz",
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)
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def url_for_version(self, version):
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if version >= Version("3.2.0"):
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url_fmt = "https://github.com/NOAA-EMC/wgrib2/archive/refs/tags/v{0}.tar.gz"
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else:
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url_fmt = "https://www.ftp.cpc.ncep.noaa.gov/wd51we/wgrib2/wgrib2.tgz.v{0}"
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return url_fmt.format(version)
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variant(
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"netcdf3",
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default=True,
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description="Link in netcdf3 library to write netcdf3 files",
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when="@:3.1",
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)
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variant(
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"netcdf4",
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default=False,
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description="Link in netcdf4 library to write netcdf3/4 files",
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when="@:3.3",
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)
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variant(
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"netcdf",
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default=False,
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description="Link in netcdf4 library to write netcdf3/4 files",
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when="@3.4:",
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)
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variant("ipolates", default=False, description="Use to interpolate to new grids")
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variant(
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"spectral", default=False, description="Spectral interpolation in -new_grid", when="@:3.1"
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)
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# Not currently working for @3.2:
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variant(
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"fortran_api",
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default=True,
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description="Make wgrib2api which allows fortran code to read/write grib2",
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)
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# Not currently working for @3.2:
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# variant("lib", default=True, description="Build library", when="@3.2:")
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variant(
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"mysql",
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default=False,
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description="Link in interface to MySQL to write to mysql database",
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when="@:3.1",
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)
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variant(
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"udf",
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default=False,
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description="Add commands for user-defined functions and shell commands",
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)
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variant("regex", default=True, description="Use regular expression library (POSIX-2)")
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variant("tigge", default=True, description="Ability for TIGGE-like variable names")
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variant(
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"proj4",
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default=False,
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description="The proj4 library is used to verify gctpc.",
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when="@:3.1",
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)
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variant(
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"aec", default=True, description="Use the libaec library for packing with GRIB2 template"
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)
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variant(
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"g2c",
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default=False,
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description="Include NCEP g2clib (mainly for testing purposes)",
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when="@:3.1",
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)
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variant(
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"disable_timezone", default=False, description="Some machines do not support timezones"
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)
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variant(
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"disable_alarm",
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default=False,
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description="Some machines do not support the alarm to terminate wgrib2",
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)
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variant("png", default=True, description="PNG encoding")
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variant("jasper", default=True, description="JPEG compression using Jasper")
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variant("openmp", default=True, description="OpenMP parallelization")
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variant("wmo_validation", default=False, description="WMO validation")
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# variant("shared", default=False, description="Enable shared library", when="+lib")
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variant("disable_stat", default=False, description="Disable POSIX feature", when="@:3.1")
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variant("openjpeg", default=False, description="Enable OpenJPEG")
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variant(
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"enable_docs", default=False, description="Build doxygen documentation", when="@3.4.0:"
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)
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conflicts("+netcdf3", when="+netcdf4")
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conflicts("+netcdf3", when="+netcdf")
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conflicts("+openmp", when="%apple-clang")
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depends_on("c", type="build")
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depends_on("fortran", type="build")
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depends_on("ip@5.1:", when="@3.5: +ipolates")
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depends_on("lapack", when="@3.5: +ipolates")
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depends_on("libaec@1.0.6:", when="@3.2: +aec")
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depends_on("netcdf-c", when="@3.2: +netcdf4")
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depends_on("jasper@:2", when="@3.2:3.4 +jasper")
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depends_on("g2c", when="@3.5: +jasper")
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depends_on("zlib-api", when="@3.2: +png")
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depends_on("libpng", when="@3.2: +png")
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depends_on("openjpeg", when="@3.2:3.4 +openjpeg")
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depends_on("g2c +openjpeg", when="@3.5: +openjpeg")
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requires("^g2c@1.9:", when="@3.5: ^g2c")
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@when("@:2 ^gmake@4.2:")
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def patch(self):
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filter_file(r"\\#define", "#define", "makefile")
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# Use Spack compiler wrapper flags
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def inject_flags(self, name, flags):
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if name == "cflags":
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if self.spec.compiler.name in ["apple-clang", "clang"]:
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flags.append("-Wno-error=implicit-function-declaration")
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# When mixing Clang/gfortran need to link to -lgfortran
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# Find this by searching for gfortran/../lib
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if self.spec.compiler.name in ["apple-clang", "clang"]:
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if "gfortran" in self.compiler.fc:
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output = Executable(self.compiler.fc)("-###", output=str, error=str)
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libdir = re.search("--libdir=(.+?) ", output).group(1)
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flags.append("-L{}".format(libdir))
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return (flags, None, None)
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class CMakeBuilder(spack.build_systems.cmake.CMakeBuilder):
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# Disable parallel build
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parallel = False
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def cmake_args(self):
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args = [self.define_from_variant(variant_map_cmake[k], k) for k in variant_map_cmake]
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# args.append(self.define_from_variant("BUILD_LIB", "lib"))
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# args.append(self.define_from_variant("BUILD_SHARED_LIB", "shared"))
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return args
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class MakefileBuilder(spack.build_systems.makefile.MakefileBuilder):
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# Disable parallel build
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parallel = False
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flag_handler = inject_flags
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def url_for_version(self, version):
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url = "https://www.ftp.cpc.ncep.noaa.gov/wd51we/wgrib2/wgrib2.tgz.v{}"
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return url.format(version)
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def edit(self, pkg, spec, prefix):
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makefile = FileFilter("makefile")
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# ifort no longer accepts -openmp
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makefile.filter(r"-openmp", "-qopenmp")
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makefile.filter(r"-Wall", " ")
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makefile.filter(r"-Werror=format-security", " ")
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# clang doesn"t understand --fast-math
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if spec.satisfies("%clang") or spec.satisfies("%apple-clang"):
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makefile.filter(r"--fast-math", "-ffast-math")
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for variant_name, makefile_option in variant_map_makefile.items():
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value = int(spec.variants[variant_name].value)
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makefile.filter(r"^%s=.*" % makefile_option, "{}={}".format(makefile_option, value))
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def setup_build_environment(self, env: EnvironmentModifications) -> None:
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if self.spec.compiler.name in ["oneapi", "intel"]:
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comp_sys = "intel_linux"
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elif self.spec.compiler.name in ["gcc", "clang", "apple-clang"]:
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comp_sys = "gnu_linux"
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env.set("COMP_SYS", comp_sys)
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def build(self, pkg, spec, prefix):
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make("-j1")
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# Move wgrib2 executable to a tempoary directory
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mkdir("install")
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mkdir(join_path("install", "bin"))
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move(join_path("wgrib2", "wgrib2"), join_path("install", "bin"))
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# Build wgrib2 library by disabling all options
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# and enabling only MAKE_FTN_API=1
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if "+fortran_api" in spec:
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make("clean")
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make("deep-clean")
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makefile = FileFilter("makefile")
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# Disable all options
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for variant_name, makefile_option in variant_map_makefile.items():
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value = 0
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makefile.filter(
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r"^%s=.*" % makefile_option, "{}={}".format(makefile_option, value)
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)
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# Need USE_REGEX in addition to MAKE_FTN_API to build lib
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makefile.filter(r"^MAKE_FTN_API=.*", "MAKE_FTN_API=1")
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makefile.filter(r"^USE_REGEX=.*", "USE_REGEX=1")
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make("lib", "-j1")
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mkdir(join_path("install", "lib"))
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mkdir(join_path("install", "include"))
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move(join_path("lib", "libwgrib2.a"), join_path("install", "lib"))
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move(join_path("lib", "wgrib2api.mod"), join_path("install", "include"))
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move(join_path("lib", "wgrib2lowapi.mod"), join_path("install", "include"))
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def install(self, pkg, spec, prefix):
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install_tree("install/", prefix)
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