55 lines
3.0 KiB
Python
55 lines
3.0 KiB
Python
##############################################################################
|
|
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
|
|
# Produced at the Lawrence Livermore National Laboratory.
|
|
#
|
|
# This file is part of Spack.
|
|
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
|
# LLNL-CODE-647188
|
|
#
|
|
# For details, see https://github.com/spack/spack
|
|
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
|
|
#
|
|
# This program is free software; you can redistribute it and/or modify
|
|
# it under the terms of the GNU Lesser General Public License (as
|
|
# published by the Free Software Foundation) version 2.1, February 1999.
|
|
#
|
|
# This program is distributed in the hope that it will be useful, but
|
|
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
|
# conditions of the GNU Lesser General Public License for more details.
|
|
#
|
|
# You should have received a copy of the GNU Lesser General Public
|
|
# License along with this program; if not, write to the Free Software
|
|
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
|
##############################################################################
|
|
from spack import *
|
|
|
|
|
|
class RGtools(RPackage):
|
|
"""Functions to assist in R programming, including: - assist in developing,
|
|
updating, and maintaining R and R packages ('ask', 'checkRVersion',
|
|
'getDependencies', 'keywords', 'scat'), - calculate the logit and inverse
|
|
logit transformations ('logit', 'inv.logit'), - test if a value is missing,
|
|
empty or contains only NA and NULL values ('invalid'), - manipulate R's
|
|
.Last function ('addLast'), - define macros ('defmacro'), - detect odd and
|
|
even integers ('odd', 'even'), - convert strings containing non-ASCII
|
|
characters (like single quotes) to plain ASCII ('ASCIIfy'), - perform a
|
|
binary search ('binsearch'), - sort strings containing both numeric and
|
|
character components ('mixedsort'), - create a factor variable from the
|
|
quantiles of a continuous variable ('quantcut'), - enumerate permutations
|
|
and combinations ('combinations', 'permutation'), - calculate and convert
|
|
between fold-change and log-ratio ('foldchange', 'logratio2foldchange',
|
|
'foldchange2logratio'), - calculate probabilities and generate random
|
|
numbers from Dirichlet distributions ('rdirichlet', 'ddirichlet'), - apply
|
|
a function over adjacent subsets of a vector ('running'), - modify the
|
|
TCP\_NODELAY ('de-Nagle') flag for socket objects, - efficient 'rbind' of
|
|
data frames, even if the column names don't match ('smartbind'), - generate
|
|
significance stars from p-values ('stars.pval'), - convert characters
|
|
to/from ASCII codes."""
|
|
|
|
homepage = "https://cran.r-project.org/package=gtools"
|
|
url = "https://cran.r-project.org/src/contrib/gtools_3.5.0.tar.gz"
|
|
list_url = "https://cran.r-project.org/src/contrib/Archive/gtools"
|
|
|
|
version('3.5.0', '45f8800c0336d35046641fbacc56bdbb')
|