36 lines
1.5 KiB
Python
36 lines
1.5 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RAnaquin(RPackage):
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"""Statistical analysis of sequins
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The project is intended to support the use of sequins (synthetic
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sequencing spike-in controls) owned and made available by the Garvan
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Institute of Medical Research. The goal is to provide a standard open
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source library for quantitative analysis, modelling and visualization of
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spike-in controls."""
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homepage = "https://bioconductor.org/packages/Anaquin"
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git = "https://git.bioconductor.org/packages/Anaquin.git"
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version('2.14.0', commit='d0a34c931a0e72080bff91dacb37dbbe26b45386')
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version('2.8.0', commit='f591d420740b77881ae0a4c16b208c63d460c601')
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version('2.6.1', commit='22b6c71697fe1e2db8f6d18f77728d0fd96fa6d6')
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version('2.4.0', commit='0d6ae80ff622151a782e4774ca274f06024a71d2')
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version('2.2.0', commit='739f4ed2b73c43f934fd65a993ecb48242a5d5da')
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version('1.2.0', commit='584d1970cc9dc1d354f9a6d7c1306bd7e8567119')
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depends_on('r@3.3:', type=('build', 'run'))
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depends_on('r-ggplot2@2.2.0:', type=('build', 'run'))
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depends_on('r-rocr', type=('build', 'run'))
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depends_on('r-knitr', type=('build', 'run'))
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depends_on('r-qvalue', type=('build', 'run'))
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depends_on('r-locfit', type=('build', 'run'))
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depends_on('r-plyr', type=('build', 'run'))
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depends_on('r-deseq2', type=('build', 'run'))
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