53 lines
2.6 KiB
Python
53 lines
2.6 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RBrms(RPackage):
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"""Bayesian Regression Models using 'Stan':
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Fit Bayesian generalized (non-)linear multivariate multilevel models using
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'Stan' for full Bayesian inference. A wide range of distributions and link
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functions are supported, allowing users to fit - among others - linear,
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robust linear, count data, survival, response times, ordinal,
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zero-inflated, hurdle, and even self-defined mixture models all in a
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multilevel context. Further modeling options include non-linear and smooth
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terms, auto-correlation structures, censored data, meta-analytic standard
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errors, and quite a few more. In addition, all parameters of the response
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distribution can be predicted in order to perform distributional
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regression. Prior specifications are flexible and explicitly encourage
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users to apply prior distributions that actually reflect their beliefs.
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Model fit can easily be assessed and compared with posterior predictive
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checks and leave-one-out cross-validation. References: Burkner (2017)
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<doi:10.18637/jss.v080.i01>; Burkner (2018) <doi:10.32614/RJ-2018-017>;
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Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>."""
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homepage = "https://github.com/paul-buerkner/brms"
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cran = "brms"
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version('2.15.0', sha256='c11701d1d8758590b74bb845b568b736e4455a81b114c7dfde0b27b7bd1bcc2f')
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depends_on('r@3.5.0:', type=('build', 'run'))
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depends_on('r-rcpp@0.12.0:', type=('build', 'run'))
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depends_on('r-rstan@2.19.2:', type=('build', 'run'))
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depends_on('r-ggplot2@2.0.0:', type=('build', 'run'))
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depends_on('r-loo@2.3.1:', type=('build', 'run'))
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depends_on('r-matrix@1.1.1:', type=('build', 'run'))
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depends_on('r-mgcv@1.8-13:', type=('build', 'run'))
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depends_on('r-rstantools@2.1.1:', type=('build', 'run'))
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depends_on('r-bayesplot@1.5.0:', type=('build', 'run'))
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depends_on('r-shinystan@2.4.0:', type=('build', 'run'))
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depends_on('r-projpred@2.0.0:', type=('build', 'run'))
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depends_on('r-bridgesampling@0.3-0:', type=('build', 'run'))
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depends_on('r-glue@1.3.0:', type=('build', 'run'))
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depends_on('r-future@1.19.0:', type=('build', 'run'))
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depends_on('r-matrixstats', type=('build', 'run'))
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depends_on('r-nleqslv', type=('build', 'run'))
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depends_on('r-nlme', type=('build', 'run'))
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depends_on('r-coda', type=('build', 'run'))
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depends_on('r-abind', type=('build', 'run'))
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depends_on('r-backports', type=('build', 'run'))
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