62927654dd
We'd like to use a consistent checksum scheme everywhere so that we can:
a) incorporate archive checksums into our specs and have a
consistent hashing algorithm across all specs.
b) index mirrors with a consistent type of checksum, and not one that
is dependent on how spack packages are written.
- [x] convert existing md5, sha224, sha512, sha1 checksums to sha256
30 lines
1.4 KiB
Python
30 lines
1.4 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack import *
|
|
|
|
|
|
class PyUmiTools(PythonPackage):
|
|
"""Tools for handling Unique Molecular Identifiers in NGS data sets"""
|
|
|
|
homepage = "https://github.com/CGATOxford/UMI-tools"
|
|
url = "https://github.com/CGATOxford/UMI-tools/archive/0.5.3.tar.gz"
|
|
|
|
version('1.0.0', sha256='7f73ef29120134123351c19089e9b7b7c03a8f241a19f8cb0e43d17f0e2f9fc7')
|
|
version('0.5.5', sha256='9834a4388dd1ea0b971071009db7ccdbd447c6019796a3c061b0bb383c9ad992')
|
|
version('0.5.4', sha256='a03e6babf188d0618a63f083b4da18120b9e8b4d473af71b585dba7de347e962')
|
|
version('0.5.3', sha256='d599f15c48c96a96ba667db1f364ebfed4ba733dd30469f9656c1717282d2ecb')
|
|
|
|
depends_on('python@2.7:')
|
|
depends_on('py-setuptools@1.1:', type='build')
|
|
depends_on('py-numpy@1.7:', type=('build', 'run'))
|
|
depends_on('py-pandas@0.12:', type=('build', 'run'))
|
|
depends_on('py-pysam@0.8.4:', type=('build', 'run'))
|
|
depends_on('py-future', type=('build', 'run'))
|
|
depends_on('py-six', type=('build', 'run'))
|
|
depends_on('py-regex', type=('build', 'run'))
|
|
depends_on('py-scipy', type=('build', 'run'))
|
|
depends_on('py-matplotlib', type=('build', 'run'))
|