62927654dd
We'd like to use a consistent checksum scheme everywhere so that we can:
a) incorporate archive checksums into our specs and have a
consistent hashing algorithm across all specs.
b) index mirrors with a consistent type of checksum, and not one that
is dependent on how spack packages are written.
- [x] convert existing md5, sha224, sha512, sha1 checksums to sha256
33 lines
1.1 KiB
Python
33 lines
1.1 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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import glob
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import os
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class Kraken(Package):
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"""Kraken is a system for assigning taxonomic labels to short DNA
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sequences, usually obtained through metagenomic studies."""
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homepage = "https://ccb.jhu.edu/software/kraken/"
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url = "https://github.com/DerrickWood/kraken/archive/v1.0.tar.gz"
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version('1.0', sha256='bade6d83233c26226d02bd427fe0a4d6cd6dc5c0300927e30d41e885a478c378')
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depends_on('perl', type=('build', 'run'))
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# Does NOT support JELLYFISH 2.0. Ver 1.1.11 is the last version of
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# JELLYFISH 1.
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depends_on('jellyfish@1.1.11', when='@1.0')
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def install(self, spec, prefix):
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installer = Executable('./install_kraken.sh')
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installer(self.stage.source_path)
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mkdirp(prefix.bin)
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files = glob.iglob('*')
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for file in files:
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if os.path.isfile(file):
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install(file, prefix.bin)
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