4de5b664cd
* r-*: updates to latest versions * r-*: add new dependencies * r-proj: fix docstring line length * r-list: add homepage * r-*: add more dependencies * r-rmpi: use virtual dependencies, conflict openmpi@5: * r-cairo: require cairo +png; +pdf for some versions; cairo +fc when +ft * r-proj: set LD_LIBRARY_PATH since rpath not respected
32 lines
1.6 KiB
Python
32 lines
1.6 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RMaldiquant(RPackage):
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"""Quantitative Analysis of Mass Spectrometry Data.
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A complete analysis pipeline for matrix-assisted laser
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desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional
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mass spectrometry data. In addition to commonly used plotting and
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processing methods it includes distinctive features, namely baseline
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subtraction methods such as morphological filters (TopHat) or the
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statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP),
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peak alignment using warping functions, handling of replicated measurements
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as well as allowing spectra with different resolutions."""
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cran = "MALDIquant"
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version("1.22.3", sha256="fd094f0ea1a163ad1bd290e789ad827a76075d82ae5ce8a8e53a7095a7479383")
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version("1.22.1", sha256="0a52a55dbe76a7e7ca50c5555fea4381eeda0c215c66e420d8dc9bfd2992411c")
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version("1.21", sha256="0771f82034aa6a77af67f3572c900987b7e6b578d04d707c6e06689d021a2ff8")
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version("1.19.3", sha256="a730327c1f8d053d29e558636736b7b66d0671a009e0004720b869d2c76ff32c")
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version("1.19.2", sha256="8c6efc4ae4f1af4770b079db29743049f2fd597bcdefeaeb16f623be43ddeb87")
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version("1.16.4", sha256="9b910dbd5dd1a739a17a7ee3f83d7e1ebad2fee89fd01a5b274415d2b6d3b0de")
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depends_on("r@3.2.0:", type=("build", "run"))
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depends_on("r@4.0.0:", type=("build", "run"), when="@1.21:")
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