
* Update py-bx-python package - add update to py-bx-python - switch to pypi downloads - set dependencies * Update var/spack/repos/builtin/packages/py-bx-python/package.py I had initially pulled version 0.8.6 and then updated that to 0.8.8 but missed the change in the python specs between those two versions. Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Fix version 0.7.4 - set dependency on python2 - add dependency on py-python-lzo - add py-python-lzo package - set py-numpy dependency to correspond to latest version that works with python2 * Add constraint for py-six dependency * Update var/spack/repos/builtin/packages/py-bx-python/package.py Ah, I had that `when` clause in and then took it out as it did not seem to be needed. I guess it is always better to be more explicit. Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Remove py-numpy constraint Let the concretizer catch the conflict with python2 and py-numpy versions. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
28 lines
1.2 KiB
Python
28 lines
1.2 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack import *
|
|
|
|
|
|
class PyBxPython(PythonPackage):
|
|
"""The bx-python project is a python library and associated set of scripts
|
|
to allow for rapid implementation of genome scale analyses."""
|
|
|
|
homepage = "https://github.com/bxlab/bx-python"
|
|
url = "https://pypi.io/packages/source/b/bx-python/bx-python-0.8.8.tar.gz"
|
|
|
|
version('0.8.8', sha256='ad0808ab19c007e8beebadc31827e0d7560ac0e935f1100fb8cc93607400bb47')
|
|
version('0.7.4',
|
|
sha256='1066d1e56d062d0661f23c19942eb757bd7ab7cb8bc7d89a72fdc3931c995cb4',
|
|
url="https://github.com/bxlab/bx-python/archive/v0.7.4.tar.gz")
|
|
|
|
depends_on('python@2.4:2.7', type=('build', 'run'), when='@:0.7')
|
|
depends_on('python@2.7:2.8,3.5:', type=('build', 'run'), when='@0.8:')
|
|
depends_on('py-setuptools', type='build')
|
|
depends_on('py-python-lzo', type=('build', 'run'), when='@:0.7')
|
|
depends_on('py-cython', type='build', when='@0.8:')
|
|
depends_on('py-numpy', type=('build', 'run'))
|
|
depends_on('py-six', type=('build', 'run'), when='@0.8:')
|