00f91ab22b
This commit either removes remaining md5 checksums, or it replaces them with sha256 checksums verified by fetching over https.
47 lines
1.6 KiB
Python
47 lines
1.6 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Revbayes(CMakePackage):
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"""Bayesian phylogenetic inference using probabilistic graphical models
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and an interpreted language."""
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homepage = "https://revbayes.github.io"
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url = "https://github.com/revbayes/revbayes/archive/v1.0.11.tar.gz"
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version('1.0.11', sha256='7e81b1952e3a63cb84617fa632f4ccdf246b4d79e7d537a423540de047dadf50')
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version('1.0.10', sha256='95e9affe8ca8d62880cf46778b6ec9dd8726e62a185670ebcbadf2eb2bb79f93')
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variant('mpi', default=True, description='Enable MPI parallel support')
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depends_on('boost')
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depends_on('mpi', when='+mpi')
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conflicts('%gcc@7.1.0:')
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root_cmakelists_dir = 'projects/cmake/build'
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@run_before('cmake')
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def regenerate(self):
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with working_dir(join_path('projects', 'cmake')):
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mkdirp('build')
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edit = FileFilter('regenerate.sh')
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edit.filter('boost="true"', 'boost="false"')
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if '+mpi' in self.spec:
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edit.filter('mpi="false"', 'mpi="true"')
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regenerate = Executable('./regenerate.sh')
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regenerate()
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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if '+mpi' in spec:
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install_path = join_path(self.build_directory, '..', 'rb-mpi')
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install(install_path, prefix.bin)
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else:
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install_path = join_path(self.build_directory, '..', 'rb')
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install(install_path, prefix.bin)
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