26 lines
943 B
Python
26 lines
943 B
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PacbioDamasker(MakefilePackage):
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"""Damasker: The Dazzler Repeat Masking Suite. This is a special fork
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required for some pacbio utilities."""
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homepage = "https://github.com/PacificBiosciences/DAMASKER"
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git = "https://github.com/PacificBiosciences/DAMASKER.git"
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version("2017-02-11", commit="144244b77d52cb785cb1b3b8ae3ab6f3f0c63264")
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depends_on("gmake", type="build")
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def edit(self, spec, prefix):
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mkdirp(prefix.bin)
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makefile = FileFilter("Makefile")
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makefile.filter(r"DEST_DIR\s*=\s*~/bin", "DEST_DIR = " + prefix.bin)
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gmf = FileFilter("GNUmakefile")
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gmf.filter(r"rsync\s*-av\s*\$\{ALL\}\s*\$\{PREFIX\}/bin", "cp ${ALL} " + prefix.bin)
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