603569e321
* Style: black 23, skip magic trailing commas * isort should use same line length as black * Fix unused import * Update version of black used in CI * Update new packages * Update new packages
122 lines
4.7 KiB
Python
122 lines
4.7 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Sbml(CMakePackage):
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"""Library for the Systems Biology Markup Language"""
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homepage = "https://sbml.org"
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maintainers("rblake-llnl")
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version("5.18.0", sha256="6c01be2306ec0c9656b59cb082eb7b90176c39506dd0f912b02e08298a553360")
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version("5.17.0", sha256="189216e1472777e4464b791c506b79267d07a5454cb23ac991452711f8e0ed3a")
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version("5.16.0", sha256="c6855481434dd2a667fef73e1ff2feade509aa2f3a76d4d06e29022975ce1496")
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version("5.15.0", sha256="c779c2a8a97c5480fe044028099d928a327261fb68cf08657ec8d4f3b3fc0a21")
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version("5.13.0", sha256="e58430edb1b454d7414bcf1be0549bf6860a6d19d73232eb58211559485c2c05")
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version("5.12.0", sha256="c637494b19269947fc90ebe479b624d36f80d1cb5569e45cd76ddde81dd28ae4")
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version("5.11.4", sha256="6429188b689b331b0b8f2c8b55b3f2339196ccd4c93191648fa767e1d02152a3")
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version("5.11.0", sha256="b21931ca7461494915c617b30d4a9f2cafe831d6ce74989b3e5874e6e3c3f72b")
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version("5.10.2", sha256="83f32a143cf657672b1050f5f79d3591c418fc59570d180fb1f39b103f4e5286")
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version("5.10.0", sha256="2cd8b37018ce8b1df869c8c182803addbce6d451512ae25a7f527b49981f0966")
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def url_for_version(self, version):
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url = "https://downloads.sourceforge.net/project/sbml/libsbml/{0}/stable/libSBML-{1}-core-plus-packages-src.tar.gz".format(
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version, version
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)
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return url
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variant("python", default=False, description="Build with python support")
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depends_on("python", when="+python")
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variant("perl", default=False, description="Build with perl support")
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depends_on("perl", when="+perl")
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variant("ruby", default=False, description="Build with ruby support")
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depends_on("ruby", when="+ruby")
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variant("r", default=False, description="Build with R support")
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depends_on("r", when="+r")
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variant("octave", default=False, description="Build with octave support")
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depends_on("octave", when="+octave")
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variant("matlab", default=False, description="Build with matlab support")
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depends_on("matlab", when="+matlab")
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variant("java", default=False, description="Build with java support")
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depends_on("java", when="+java")
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variant("mono", default=False, description="Build with mono support")
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depends_on("mono", when="+mono")
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variant("cpp", default=False, description="All c++ includes should be under a namespace")
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depends_on("swig@2:", type="build")
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depends_on("cmake", type="build")
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depends_on("zlib")
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depends_on("bzip2")
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depends_on("libxml2")
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def cmake_args(self):
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spec = self.spec
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args = [
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"-DENABLE_COMP:BOOL=ON",
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"-DENABLE_FBC:BOOL=ON",
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"-DENABLE_GROUPS:BOOL=ON",
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"-DENABLE_LAYOUT:BOOL=ON",
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"-DENABLE_QUAL:BOOL=ON",
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"-DENABLE_RENDER:BOOL=ON",
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"-DWITH_BZIP2:BOOL=ON",
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"-DWITH_CHECK:BOOL=OFF",
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"-DWITH_DOXYGEN:BOOL=OFF",
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"-DWITH_EXAMPLES:BOOL=OFF",
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"-DWITH_EXPAT:BOOL=OFF",
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"-DWITH_LIBXML:BOOL=ON",
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"-DWITH_SWIG:BOOL=ON",
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"-DWITH_WALL:BOOL=ON",
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"-DWITH_XERCES:BOOL=OFF",
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"-DWITH_ZLIB:BOOL=ON",
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]
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args.append(self.define_from_variant("WITH_CPP_NAMESPACE", "cpp"))
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if "+python" in spec:
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args.extend(
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["-DWITH_PYTHON:BOOL=ON", "-DWITH_PYTHON_INCLUDE:PATH=%s" % spec["python"].prefix]
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)
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else:
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args.append("-DWITH_PYTHON:BOOL=OFF")
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args.append(self.define_from_variant("WITH_CSHARP", "mono"))
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if "+java" in spec:
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args.extend(
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[
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"-DWITH_JAVA:BOOL=ON",
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"-DJDK_PATH:STRING=%s" % spec["java"].prefix,
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"-DJAVA_INCLUDE_PATH:STRING=%s" % spec["java"].prefix,
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]
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)
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else:
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args.append("-DWITH_JAVA:BOOL=OFF")
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if "+matlab" in spec:
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args.extend(
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[
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"-DWITH_MATLAB:BOOL=ON",
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"-DMATLAB_ROOT_PATH:PATH=%s" % spec["matlab"].prefix,
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"-DWITH_MATLAB_MEX:BOOL=ON",
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]
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)
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else:
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args.append("-DWITH_MATLAB:BOOL=OFF")
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args.append(self.define_from_variant("WITH_OCTAVE", "octave"))
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args.append(self.define_from_variant("WITH_PERL", "perl"))
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args.append(self.define_from_variant("WITH_R", "r"))
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args.append(self.define_from_variant("WITH_RUBY", "ruby"))
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return args
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