42 lines
1.2 KiB
Python
42 lines
1.2 KiB
Python
# Copyright Spack Project Developers. See COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Generax(CMakePackage):
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"""GeneRax is a parallel tool for species tree-aware maximum likelihood
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based gene family tree inference under gene duplication, transfer,
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and loss.
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"""
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homepage = "https://github.com/BenoitMorel/GeneRax"
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git = "https://github.com/BenoitMorel/GeneRax.git"
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maintainers("snehring")
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license("AGPL-3.0-or-later")
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version("master", branch="master", submodules=True)
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version("dev", branch="dev", submodules=True)
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version("2.0.4", commit="e4fab40f407bdd3b588d3d69a449f8c1be56f9fa", submodules=True)
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version("2.0.1", commit="0623dae55dd602a60faae63e9991fa8d41782456", submodules=True)
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depends_on("c", type="build") # generated
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depends_on("cxx", type="build") # generated
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depends_on("cmake@3.0.1:", type="build")
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depends_on("mpi", when="+mpi")
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depends_on("bison")
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depends_on("flex")
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variant("mpi", default=False, description="Build with MPI support")
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build_directory = "build"
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patch("model-stdexcept.patch", when="@:2.0.4")
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def install(self, spec, prefix):
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install_tree("build/bin", prefix.bin)
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