24 lines
707 B
Python
24 lines
707 B
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack import *
|
|
|
|
|
|
class Fermi(MakefilePackage):
|
|
"""A WGS de novo assembler based on the FMD-index for large genomes."""
|
|
|
|
homepage = "https://github.com/lh3/fermi"
|
|
url = "https://github.com/downloads/lh3/fermi/fermi-1.1.tar.bz2"
|
|
|
|
version('1.1', 'd5f006315652b6f18070b31474ca5ebb')
|
|
|
|
depends_on('zlib')
|
|
depends_on('perl', type='run')
|
|
|
|
def install(self, spec, prefix):
|
|
mkdir(prefix.bin)
|
|
install('fermi', prefix.bin)
|
|
install('run-fermi.pl', prefix.bin)
|