32 lines
1.4 KiB
Python
32 lines
1.4 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RAbadata(RPackage):
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"""Averaged gene expression in human brain regions from Allen Brain Atlas.
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Provides the data for the gene expression enrichment analysis conducted
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in the package 'ABAEnrichment'. The package includes three datasets
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which are derived from the Allen Brain Atlas: (1) Gene expression data
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from Human Brain (adults) averaged across donors, (2) Gene expression
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data from the Developing Human Brain pooled into five age categories and
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averaged across donors and (3) a developmental effect score based on the
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Developing Human Brain expression data. All datasets are restricted to
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protein coding genes."""
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bioc = "ABAData"
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version("1.24.0", commit="c4c42701f995ab8d5ede7f36ff06650493c82e36")
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version("1.20.0", commit="c08a841ffb54d6555eb80b90a7a8afe7e48201b3")
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version("1.14.0", commit="ed7460e7d2948684db69dd4b4f8e135af50198bd")
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version("1.12.0", commit="9c2f0fbda75b06a0807bd714528915920899282d")
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version("1.10.0", commit="197edb2c3fc733c9e44dde2b9b86ecedcd2c5e1a")
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version("1.8.0", commit="181a4af1af349064eb432255970e925ae2564e1a")
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version("1.6.0", commit="517c18a3d1809dde0291eeb47dd2545c7cfcdabe")
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depends_on("r@3.2:", type=("build", "run"))
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