57 lines
2.8 KiB
Python
57 lines
2.8 KiB
Python
##############################################################################
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# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class RCner(RPackage):
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""""Large-scale identification and advanced visualization of sets of
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conserved noncoding elements."""
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homepage = "http://www.example.co://bioconductor.org/packages/CNEr/"
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url = "https://git.bioconductor.org/packages/CNEr"
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version('1.14.0', git='https://git.bioconductor.org/packages/CNEr', commit='b8634d65c51728c815127e22b45eba7c9b9db897')
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depends_on('r-biostrings@2.33.4:', type=('build', 'run'))
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depends_on('r-dbi@0.7:', type=('build', 'run'))
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depends_on('r-rsqlite@0.11.4:', type=('build', 'run'))
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depends_on('r-genomeinfodb@1.1.3:', type=('build', 'run'))
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depends_on('r-genomicranges@1.23.16:', type=('build', 'run'))
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depends_on('r-rtracklayer@1.25.5:', type=('build', 'run'))
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depends_on('r-xvector@0.5.4:', type=('build', 'run'))
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depends_on('r-genomicalignments@1.1.9:', type=('build', 'run'))
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depends_on('r-s4vectors@0.13.13:', type=('build', 'run'))
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depends_on('r-iranges@2.5.27:', type=('build', 'run'))
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depends_on('r-readr@0.2.2:', type=('build', 'run'))
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depends_on('r-biocgenerics', type=('build', 'run'))
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depends_on('r-reshape2@1.4.1:', type=('build', 'run'))
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depends_on('r-ggplot2@2.1.0:', type=('build', 'run'))
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depends_on('r-powerlaw@0.60.3:', type=('build', 'run'))
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depends_on('r-annotate@1.50.0:', type=('build', 'run'))
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depends_on('r-go-db@3.3.0:', type=('build', 'run'))
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depends_on('r-keggrest@1.14.0:', type=('build', 'run'))
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depends_on('r-utils@2.3.0:', type=('build', 'run'))
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depends_on('r@3.4.3:3.4.9', when='@1.14.0')
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