eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
29 lines
950 B
Python
29 lines
950 B
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class PyPysam(PythonPackage):
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"""A python module for reading, manipulating and writing genomic data
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sets."""
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homepage = "https://pypi.python.org/pypi/pysam"
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url = "https://github.com/pysam-developers/pysam/archive/v0.14.1.tar.gz"
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version('0.14.1', 'ad88fa5bbcc0fdf4a936734691d9c9d1')
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version('0.13', 'a9b502dd1a7e6403e35e6972211688a2')
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version('0.11.2.2', '56230cd5f55b503845915b76c22d620a')
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version('0.7.7', 'eaf9f37cbccc5e2708754d045909c1a0')
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depends_on('py-setuptools', type='build')
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depends_on('py-cython@0.21:', type='build')
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depends_on('curl')
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depends_on('bcftools')
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depends_on('htslib')
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depends_on('samtools')
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depends_on('htslib@:1.6', when='@:0.13')
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