Sinan ba58b2f43a GDAL package: add version 2.4.1 (#11328)		2019-05-04 03:30:10 +09:00
..
abinit
abyss
accfft
ack
activeharmony
acts-core
adept-utils
adios
adios2
adlbx
adol-c
aegean
aida
albany
albert
alglib
allinea-reports
allpaths-lg
alquimia	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
alsa-lib
aluminum
amg	AMG: update version (#11099)	2019-04-03 11:11:06 -06:00
amg2013
amp
ampliconnoise
amrex	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
amrvis
andi
angsd
ant
antlr
ants
aoflagger
aom	ffmpeg package: add aom support (#11210)	2019-05-02 03:33:03 +09:00
ape
aperture-photometry
apex
apple-libunwind
applewmproto
appres
apr
apr-util
aragorn
archer
argobots	Add margo package and add rc1 tag for argobots package (#11281)	2019-05-01 09:47:34 +09:00
argp-standalone
argtable
arlecore
arm-forge	arm-forge: add all available versions (#11198)	2019-05-03 08:14:25 -07:00
armadillo
arpack-ng	arpack-ng package: add version 3.7.0 (#11041)	2019-04-02 17:08:16 -07:00
arrow	py-arrow and arrow: add version 0.12.1 (#11004)	2019-04-02 17:00:04 -07:00
ascent
asciidoc
asciidoctor
aspa
aspcud
aspect
aspell
aspell6-de
aspell6-en
aspell6-es
aspera-cli
assimp
astra
astral	astral: add 5.6.1 (#11195)	2019-04-17 09:32:50 -05:00
astyle	remove myself from maintainers of some packages (#11319)	2019-04-30 10:16:53 +02:00
at-spi2-atk
at-spi2-core
atk
atlas
atom-dft
atompaw
atop
augustus
autoconf
autodock-vina
autofact
autogen
automaded
automake
axel
axl
bamdst
bamtools
bamutil
barrnap
bash
bash-completion
bats
bazel
bbcp
bbmap
bc
bcftools
bcl2fastq2
bdftopcf
bdw-gc
bear
beast1
beast2
beast-tracer
bedops
bedtools2
beforelight
benchmark
berkeley-db
bertini
bib2xhtml
bigreqsproto
binutils
bioawk
biobloom
biopieces
bismark
bison
bitmap
blasr
blasr-libcpp
blast2go
blast-legacy
blast-plus
blat
blaze
blis
bliss
blitz
bmake
bmi	add BMI package (#11310)	2019-05-03 09:11:31 +02:00
bml
bohrium
bolt
bookleaf-cpp
boost	boost: add 1.70.0 (#11183)	2019-04-15 09:59:04 +02:00
boostmplcartesianproduct
bowtie
bowtie2
boxlib
bpp-core
bpp-phyl
bpp-seq
bpp-suite
bracken
braker
branson	branson: fix install (#11093)	2019-04-02 16:44:46 -06:00
breakdancer
breseq
bridger
brigand
brotli
bsseeker2
bucky
bumpversion
busco
butter
bwa
bwtool
byobu
bzip2
c-blosc
c-lime
cabana
caffe
cairo
cairomm
caliper
callpath
camellia
candle-benchmarks
cantera
canu
cap3
capstone
cardioid
cares
casacore
cask
casper
catalyst	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
catch
cbench
cblas
cbtf
cbtf-argonavis
cbtf-argonavis-gui
cbtf-krell
cbtf-lanl
ccache
cctools
cdbfasta
cdd
cddlib
cdecimal
cdhit	cdhit - add new release 4.8.1 checksum (#11130)	2019-04-09 10:33:07 +02:00
cdo
ceed	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
cereal
ceres-solver
cfitsio
cgal	cgal: add version 4.13	2019-04-18 19:31:08 -07:00
cgm
cgns
channelflow
chapel
charliecloud	add charliecloud 0.9.9 (#11190)	2019-04-15 17:59:10 -05:00
charmpp
chatterbug
check
chlorop
chombo
chrpath
circos
cistem
citcoms
cityhash
clamr
clapack
claw
cleaveland4
cleverleaf
clfft
clhep
clingo
cln	New package: CLN library (#11167)	2019-04-16 16:03:51 -07:00
cloc
cloog
cloverleaf
cloverleaf3d
clp
clustalo
clustalw
cmake	cmake: add version 3.14.2 (#11192)	2019-04-15 17:17:24 -05:00
cmocka
cmor
cnmem
cnpy
cntk
cntk1bitsgd
cnvnator
codar-cheetah
codes
coevp
cohmm
coinhsl
colm
colordiff
comd
commons-lang
commons-lang3
commons-logging
compiz
compositeproto
conduit
connect-proxy
constype
converge
coreutils
corset
cosmomc
cosp2
cotter
cp2k	CP2K package: add versions and tests, adjust optimization flags (#11263)	2019-05-01 04:52:13 +09:00
cppad
cppcheck
cppgsl
cpprestsdk
cppunit	cppunit: New version 1.14.0. (#11359)	2019-05-03 09:12:22 +02:00
cppzmq
cpu-features
cpuinfo
cquery
cram
cryptopp
cscope
csdp
ctffind
cub
cube
cubelib
cubew
cuda
cuda-memtest
cudnn
cufflinks
cups
curl
cvs
czmq
dakota
daligner
damageproto
damaris
damselfly
darshan-runtime	Darshan 3.1.7 and develop versions fpr darshan-runtime and darshan-util (#11269)	2019-05-01 09:42:32 +09:00
darshan-util	Darshan 3.1.7 and develop versions fpr darshan-runtime and darshan-util (#11269)	2019-05-01 09:42:32 +09:00
dash
datamash
dataspaces
davix
dbcsr
dbus	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
dcmtk
dd4hep
dealii	Ginkgo package: update to release 1.0.0 (#11312)	2019-05-02 08:25:39 +09:00
dealii-parameter-gui
deconseq-standalone
dejagnu
delly2
denovogear
dftfe
dia
dialign-tx
diamond
diffsplice
diffutils
direnv
discovar
discovardenovo
dislin	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
diy
dlpack
dmd
dmlc-core
dmtcp
dmxproto
docbook-xml
docbook-xsl
dos2unix
dotnet-core-sdk
double-conversion
doxygen
draco
dri2proto
dri3proto
ds
dsdp
dsrc
dtcmp
dyninst
dysco
ea-utils
easybuild
ebms
eccodes
ecflow
eclipse-gcj-parser
ecp-io-sdk	New Packages: ecp-io-sdk and ecp-viz-sdk (#11073)	2019-04-10 16:18:05 -07:00
ecp-proxy-apps	ecp-proxy-apps: update version (#11119)	2019-04-06 15:33:29 -07:00
ecp-viz-sdk	New Packages: ecp-io-sdk and ecp-viz-sdk (#11073)	2019-04-10 16:18:05 -07:00
ed
editline
editres
eigen
elasticsearch
elemental
elfutils
elk
elmer-fem
elpa
elsd
elsdc
emacs
ember
emboss
encodings
energyplus
entrezdirect
environment-modules	environment-modules: add version 4.2.4 (#11307)	2019-04-27 20:32:57 +02:00
eospac
eqr
er
erfa
erne
es
esmf
essl
ethminer
etsf-io
everytrace
everytrace-example
evieext
exabayes
examinimd
exampm
exasp2
exchanger
exmcutils
exodusii
exonerate
expat
expect
express
extrae
exuberant-ctags
eztrace
f18
f90cache
fabtests	Mercury package: add version 1.0.1 and update dependencies (#10906)	2019-04-20 15:03:18 -07:00
falcon
fast-global-file-status
fasta
fastjar
fastmath	Update FASTMath metapackage (#11171)	2019-04-12 16:54:19 -05:00
fastme
fastphase
fastq-screen
fastqc
fastqvalidator
fasttree
fastx-toolkit
fenics
fermi
fermikit
fermisciencetools
ferret
ffmpeg	ffmpeg package: add aom support (#11210)	2019-05-02 03:33:03 +09:00
fftw
figtree
fimpute
findutils
fio	fio package: add optional libaio dependency (#11083)	2019-04-02 18:21:45 -07:00
fish
fixesproto
flac
flang
flann
flash
flatbuffers
flatcc
flecsale
flecsi
flex
flint
flit
fltk
flux-core	add pkgconfig as dependence for flux packages (#11036)	2019-04-01 18:33:55 +02:00
flux-sched	add pkgconfig as dependence for flux packages (#11036)	2019-04-01 18:33:55 +02:00
fluxbox
fmt
foam-extend
folly
font-adobe-75dpi
font-adobe-100dpi
font-adobe-utopia-75dpi
font-adobe-utopia-100dpi
font-adobe-utopia-type1
font-alias
font-arabic-misc
font-bh-75dpi
font-bh-100dpi
font-bh-lucidatypewriter-75dpi
font-bh-lucidatypewriter-100dpi
font-bh-ttf
font-bh-type1
font-bitstream-75dpi
font-bitstream-100dpi
font-bitstream-speedo
font-bitstream-type1
font-cronyx-cyrillic
font-cursor-misc
font-daewoo-misc
font-dec-misc
font-ibm-type1
font-isas-misc
font-jis-misc
font-micro-misc
font-misc-cyrillic
font-misc-ethiopic
font-misc-meltho
font-misc-misc
font-mutt-misc
font-schumacher-misc
font-screen-cyrillic
font-sony-misc
font-sun-misc
font-util
font-winitzki-cyrillic
font-xfree86-type1
fontcacheproto
fontconfig
fontsproto
fonttosfnt
fp16
fpc
fqtrim
fr-hit
freebayes
freeglut
freetype
freexl
fseq
fsl	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
fslsfonts
fstobdf
fstrack
ftgl	ftgl: update to 2.1.3-rc5. (#11214)	2019-04-23 09:42:10 -05:00
funhpc
fyba
fzf	fzf package: change mirror and add vim plugin (#10920)	2019-04-10 16:23:37 -07:00
g4abla
g4emlow
g4ensdfstate
g4ndl
g4neutronxs
g4photonevaporation
g4pii
g4radioactivedecay
g4realsurface
g4saiddata
g4tendl
gapbs
gapcloser
gapfiller
gasnet
gatk
gaudi
gaussian
gawk
gblocks
gcc	Features: Improve Spec format strings (#10556)	2019-04-17 18:21:40 -07:00
gccmakedep
gccxml
gconf
gcta
gdal	GDAL package: add version 2.4.1 (#11328)	2019-05-04 03:30:10 +09:00
gdb
gdbm
gdk-pixbuf
gdl
geant4	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
geant4-data
gearshifft
gemmlowp
genemark-et
genomefinisher
genometools
geopm
geos
gettext
gflags
ghost
ghostscript
ghostscript-fonts
giflib
ginkgo	Ginkgo package: update to release 1.0.0 (#11312)	2019-05-02 08:25:39 +09:00
git
git-fat-git
git-imerge
git-lfs	git-lfs: add version 2.7.2 (#11311)	2019-04-30 10:20:03 +02:00
gl2ps
glew
glfmultiples
glib
glibmm
glimmer
glm
global
globalarrays
globus-toolkit
glog
gloo
glpk
glproto
glvis
gmake
gmap-gsnap
gmime
gmodel
gmp
gmsh
gmt
gnat
gnu-prolog
gnupg
gnuplot
gnutls
go
go-bootstrap
gobject-introspection
googletest
gotcha
gource
gperf
gperftools
gpgme
gplates	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
grackle
gradle
grandr
graph500
graphicsmagick
graphlib
graphmap
graphviz
grass	grass package: use url_for_version, add versions (#11324)	2019-05-03 10:40:23 +09:00
grib-api
grnboost
groff
gromacs	gromacs: added 2019 patch releases (#11211)	2019-04-17 12:48:06 -05:00
gsl
gslib	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
gtkmm
gtkorvo-atl
gtkorvo-cercs-env
gtkorvo-dill
gtkorvo-enet
gtkplus
gts
guidance
guile
gurobi
h5hut
h5part
h5utils
h5z-zfp
hacckernels	hacckernels: fix install (#11089)	2019-04-02 15:58:40 -06:00
hadoop
halc
hapcut2
hapdip
haploview
harfbuzz	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
harminv
hc
hdf
hdf5	hdf5: add symbols (#10991)	2019-04-20 15:09:46 -07:00
hdf5-blosc
help2man
henson
hepmc
heppdt
hic-pro
highfive
highwayhash
hiop
hisat2
hisea
hmmer
homer
hoomd-blue
hpccg
hpctoolkit
hpcviewer
hpgmg	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
hpl
hpx	hpx: overhaul of the package recipe (#11194)	2019-04-19 16:58:46 +02:00
hpx5
hsakmt
hstr
htop
htslib
httpie
hub
hugo
hunspell
hwloc
hybpiper
hydra
hydrogen
hyphy
hypre	hypre: add @osborn9 to maintainers (#11233)	2019-04-19 15:55:35 -05:00
i3
ibm-java
ibmisc
iceauth
icedtea
icet
ico
icu4c
id3lib
idba
igraph
igvtools
ilmbase
image-magick
imake
imp
impute2
infernal
inputproto
intel
intel-daal
intel-gpu-tools
intel-ipp
intel-mkl	intel: consolidate libs() in the base class (#11143)	2019-04-09 13:54:21 -07:00
intel-mkl-dnn
intel-mpi
intel-parallel-studio	intel: consolidate libs() in the base class (#11143)	2019-04-09 13:54:21 -07:00
intel-pin
intel-tbb
intel-xed
intltool
ior
iozone
iperf2
iperf3
ipopt
isaac
isaac-server
isl
itstool
itsx
jackcess
jags
jansson
jasper
jbigkit
jchronoss
jdk	jdk package: Fix fetching with curl 7.64.0+ (#11108)	2019-04-19 14:43:45 -07:00
jellyfish
jemalloc
jmol
jq
json-c
json-cwx
json-glib
jsoncpp
judy
julia
k8
kahip
kaiju
kaks-calculator
kaldi
kallisto
karma
kbproto
kdiff3
kealib
kentutils
kibana
kim-api	kim-api and openkim-models: version update and rename (#11065)	2019-04-02 17:44:24 -07:00
kitty	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
kmergenie
kokkos	kokkos: update cuda conflict (#11110)	2019-04-08 08:58:35 +02:00
kraken
krb5
krims
kripke	kripke: fix install (#11090)	2019-04-02 16:05:21 -06:00
kvasir-mpl
kvtree
ladot
laghos	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
lammps
last
lastz
latte
launchmon
lazyten
lbann
lbxproxy
lbzip2
lcals
lcms
ldc
ldc-bootstrap
legion
lemon
leveldb
lftp
libaec
libaio
libapplewm
libarchive
libassuan
libatomic-ops
libbeagle
libbeato
libbsd
libbson
libcanberra
libcap
libceed	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
libcerf
libcheck
libcint
libcircle
libconfig
libcroco
libctl
libdivsufsort
libdmx
libdrm
libdwarf
libeatmydata
libedit
libelf
libemos
libepoxy	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
libev
libevent
libevpath
libfabric	Mercury package: add version 1.0.1 and update dependencies (#10906)	2019-04-20 15:03:18 -07:00
libffi
libffs
libfontenc
libfs
libgcrypt
libgd
libgeotiff
libgit2
libgpg-error
libgpuarray
libgridxc
libgtextutils
libharu
libhio
libiberty
libice
libiconv
libint
libjpeg
libjpeg-turbo
libksba
liblbxutil
liblockfile
libmatheval
libmaxminddb
libmesh
libmng
libmongoc
libmonitor
libnbc
libnl
libnova
libnsl
libogg
liboldx
libpcap
libpciaccess
libpfm4
libpipeline
libplist
libpmemobj-cpp	New package: libpmemobj-cpp (#11309)	2019-05-02 08:12:01 +09:00
libpng
libpsl
libpthread-stubs
libquo
librom
libseccomp
libsharp
libshm
libsigcpp
libsigsegv
libsm
libsodium	added libsodium 1.0.16 and 1.0.17 (#11231)	2019-04-19 12:19:51 -07:00
libspatialindex
libspatialite
libsplash
libssh
libssh2
libsvm
libszip
libtasn1
libtermkey
libtiff
libtirpc
libtool
libunistring	libunistring: added newer versions and patch older ones (#11255)	2019-05-04 03:21:43 +09:00
libunwind
libusb
libusbmuxd
libuuid
libuv
libvorbis
libvterm
libwebsockets
libwindowswm
libx11	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
libxau
libxaw
libxaw3d
libxc
libxcb
libxcomposite
libxcursor
libxdamage
libxdmcp
libxevie
libxext
libxfixes
libxfont
libxfont2
libxfontcache
libxft
libxi
libxinerama
libxkbcommon	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
libxkbfile
libxkbui
libxml2	libxml2: New version 2.9.9. (#11357)	2019-05-03 09:13:22 +02:00
libxmu
libxp
libxpm
libxpresent
libxprintapputil
libxprintutil
libxrandr
libxrender
libxres
libxscrnsaver
libxshmfence
libxslt
libxsmm	LIBXSMM: add version 1.11, update wrapper settings (#11317)	2019-05-02 08:45:00 +09:00
libxstream
libxt
libxtrap
libxtst
libxv
libxvmc
libxxf86dga
libxxf86misc
libxxf86vm
libyaml
libyogrt
libzip
lighttpd
likwid	remove myself from maintainers of some packages (#11319)	2019-04-30 10:16:53 +02:00
linkphase3
linux-headers
listres
llvm	llvm: depend on python only when +python (#11348)	2019-05-02 16:21:06 -04:00
llvm-openmp-ompt
lm-sensors
lmdb
lmod
lndir
log4cplus
log4cxx
loki
lordec
lrslib
lrzip
lsof
ltrace
lua	Lua: Fix unresolved symbols in shared library by linking with libdl.so (#11260)	2019-05-01 08:41:08 +09:00
lua-bitlib
lua-jit
lua-lpeg
lua-luafilesystem
lua-luaposix
lua-mpack
luit
lulesh
lumpy-sv
lwgrp
lwm2
lz4	lz4: Add 1.9.0 (#11207)	2019-04-17 09:30:23 -05:00
lzma
lzo
m4
macsio	macsio: fix install (#11088)	2019-04-02 15:58:21 -06:00
mad-numdiff
mafft
magics
magma	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
makedepend
mallocmc
man-db
manta
mapserver
maq
margo	Add margo package and add rc1 tag for argobots package (#11281)	2019-05-01 09:47:34 +09:00
mariadb
mariadb-c-client
masa
masurca	Masurca (#11286)	2019-04-30 08:24:12 -05:00
matio
matlab
maven
maverick
mawk
mbedtls
mc
mcl
mdtest
med
meep
mefit
megahit
memaxes
meme
memkind
memsurfer	memsurfer: add new package	2019-04-18 19:31:08 -07:00
meraculous
mercurial
mercury	add BMI package (#11310)	2019-05-03 09:11:31 +02:00
mesa	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
mesa-glu	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
meshkit
meson
mesquite
metabat
metaphysicl
metis
mfem	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
mgis	Add new TFEL' versions (3.0.4, 3.1.4 and 3.2.1). Add new MGIS version (1.0.1). (#11109)	2019-04-08 09:09:14 +02:00
microbiomeutil
migrate
minced
mindthegap
miniaero
miniamr	miniamr: add develop version and update release (#11101)	2019-04-03 16:17:04 -06:00
miniasm
miniconda2	miniconda 2 and 3 packages: add version 4.6.14 (#11232)	2019-04-19 17:42:02 -07:00
miniconda3	miniconda 2 and 3 packages: add version 4.6.14 (#11232)	2019-04-19 17:42:02 -07:00
minife
minighost
minigmg
minimap2
minimd
miniqmc	miniqmc: fix install (#11091)	2019-04-02 16:23:37 -06:00
minisign
minismac2d
minitri
minivite
minixyce
minuit
mira
mirdeep2
mitofates
mitos
mixcr
mkfontdir
mkfontscale
mlhka
mmg
moab
modern-wheel
mofem-cephas
mofem-fracture-module
mofem-minimal-surface-equation
mofem-users-modules
molcas
mongo-cxx-driver
mono
mosh
mothur
motif
motioncor2
mount-point-attributes
mozjs
mpark-variant
mpc
mpdecimal
mpe2
mpest
mpfr
mpibash
mpiblast
mpich
mpifileutils	mpifileutils v0.9.1 (#11216)	2019-04-17 18:11:14 -05:00
mpilander
mpileaks
mpip
mpir
mpix-launch-swift
mrbayes
mrnet
mrtrix3	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
mscgen
msgpack-c
mshadow
msmc
multitail
multitime
multiverso
mummer
mumps	MUMPS: add version 5.2.0 (#11234)	2019-04-19 15:55:56 -05:00
munge
muparser
muscle
muse
muster
mvapich2	mvapich2 package: add version 2.3.1 (#11037)	2019-04-02 17:07:06 -07:00
mxml
mxnet
mysql	mysql: 5.7.X versions link boost (#11237)	2019-04-19 15:34:55 -07:00
nag
nalu
nalu-wind	nalu-wind package: require hypre without superlu-dist. (#11022)	2019-04-02 17:02:22 -07:00
namd
nano
nanoflann
nanopb
nasm
nauty
ncbi-magicblast
ncbi-rmblastn
ncbi-toolkit
nccl
nccmp
ncdu
ncftp
ncl
nco
ncurses
ncview
ndiff
nek5000	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
nekbone	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
nekcem	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
nektar
nektools	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
neovim
nest	nest: change cmake_options to args. (#11273)	2019-04-24 11:09:49 +09:00
netcdf
netcdf-cxx	netcdf-cxx package: set ldflags for hdf5 and netcdf (#11026)	2019-04-02 17:04:09 -07:00
netcdf-cxx4
netcdf-fortran
netgauge
netgen
netlib-lapack
netlib-scalapack	netlib-scalapack: fix compatibility with mpi2 i.e openmpi-4 (#11124)	2019-04-07 10:01:54 -05:00
netlib-xblas
nettle
neuron
nextflow
nfft
nghttp2
nginx
ngmlr
ninja
ninja-fortran
nix
nlohmann-json
nlopt
nmap
nnvm
node-js
notmuch
npb
npm
npth
nspr
numactl
numdiff	remove myself from maintainers of some packages (#11319)	2019-04-30 10:16:53 +02:00
nut	nut: fix install (#11092)	2019-04-02 16:38:03 -06:00
nvptx-tools
nwchem
nyancat
ocaml
occa	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
oce
oclint
oclock
octave
octave-optim
octave-splines
octave-struct
octopus
of-adios-write	Features: Improve Spec format strings (#10556)	2019-04-17 18:21:40 -07:00
of-catalyst
of-precice	Features: Improve Spec format strings (#10556)	2019-04-17 18:21:40 -07:00
omega-h	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
ompss
ompt-openmp
oniguruma
ont-albacore
opa-psm2
opam
opari2
openbabel
openblas	OpenBLAS: Allow enabling/disabling AVX2/512 support	2019-04-20 16:43:11 -07:00
opencoarrays
opencv	OpenCV: New versions, adjust protobuf dependency (#11243)	2019-05-01 03:37:47 +09:00
openexr
openfast
openfoam-com	openfoam-com package: build without kahip by default (#11259)	2019-05-01 08:26:54 +09:00
openfoam-org
openfst
opengl	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
openglu
openimageio
openjdk
openjpeg
openkim-models	kim-api and openkim-models: version update and rename (#11065)	2019-04-02 17:44:24 -07:00
openmc
openmpi	Add Open MPI v3.0.4 (#11221)	2019-04-18 12:33:26 -05:00
opennurbs
openpa
openpmd-api
openscenegraph
openslide
openspeedshop
openspeedshop-utils
openssh
openssl
opium
optional-lite
opus
orca
orfm
orthofiller
orthofinder
orthomcl
osmctools
osu-micro-benchmarks
otf
otf2
p4est
p7zip
pacbio-daligner
pacbio-damasker
pacbio-dazz-db
pacbio-dextractor
packmol
pacvim
pagit
pagmo
pal
paml
panda
pandaseq
pango
pangomm
papi
papyrus
paradiseo
parallel
parallel-netcdf
paraver
paraview	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
parmetis
parmgridgen
parquet
parsimonator
parsplice
partitionfinder
patch
patchelf
pathfinder
pax-utils
pbbam
pbmpi
pbsuite
pcma
pcre
pcre2
pdf2svg
pdftk
pdsh
pdt
pegtl
pennant
percept
perl	Fix bug when system perl is used. (#11034)	2019-04-10 08:44:27 -05:00
perl-algorithm-diff
perl-app-cmd
perl-array-utils
perl-b-hooks-endofscope
perl-bio-perl
perl-bit-vector
perl-cairo
perl-capture-tiny
perl-carp-clan
perl-cgi
perl-class-data-inheritable
perl-class-inspector
perl-class-load
perl-class-load-xs
perl-clone
perl-clone-choose
perl-compress-raw-bzip2
perl-compress-raw-zlib
perl-config-general
perl-contextual-return
perl-cpan-meta-check
perl-data-dumper
perl-data-optlist
perl-data-stag
perl-dbd-mysql
perl-dbd-sqlite
perl-dbfile
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-digest-md5
perl-dist-checkconflicts
perl-encode-locale
perl-eval-closure
perl-exception-class
perl-exporter-tiny
perl-extutils-config
perl-extutils-depends
perl-extutils-helpers
perl-extutils-installpaths
perl-extutils-makemaker
perl-extutils-pkgconfig
perl-file-copy-recursive
perl-file-homedir
perl-file-listing
perl-file-pushd
perl-file-sharedir-install
perl-file-slurp-tiny
perl-file-slurper
perl-file-which
perl-font-ttf
perl-gd
perl-gd-graph
perl-gd-text
perl-gdgraph-histogram
perl-graph
perl-graph-readwrite
perl-hash-merge
perl-html-parser
perl-html-tagset
perl-http-cookies
perl-http-daemon
perl-http-date
perl-http-message
perl-http-negotiate
perl-inline
perl-inline-c
perl-intervaltree
perl-io-compress
perl-io-html
perl-io-sessiondata
perl-io-socket-ssl
perl-io-string
perl-json
perl-libwww-perl
perl-list-moreutils
perl-log-log4perl
perl-logger-simple
perl-lwp
perl-lwp-mediatypes
perl-lwp-protocol-https
perl-math-bezier
perl-math-cdf
perl-math-cephes
perl-math-matrixreal
perl-math-round
perl-math-vecstat
perl-module-build
perl-module-build-tiny
perl-module-implementation
perl-module-runtime
perl-module-runtime-conflicts
perl-moose
perl-mozilla-ca
perl-mro-compat
perl-namespace-clean
perl-net-http
perl-net-scp-expect
perl-net-ssleay
perl-number-format
perl-object-insideout
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-parallel-forkmanager
perl-params-util
perl-params-validate
perl-parse-recdescent
perl-pdf-api2
perl-pegex
perl-perl4-corelibs
perl-perl6-slurp
perl-perlio-gzip
perl-perlio-utf8-strict
perl-readonly
perl-regexp-common
perl-scalar-list-utils
perl-scalar-util-numeric
perl-set-intspan
perl-soap-lite
perl-star-fusion
perl-statistics-basic
perl-statistics-descriptive
perl-statistics-pca
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-uplevel
perl-svg
perl-swissknife
perl-task-weaken
perl-term-readkey
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-most
perl-test-needs
perl-test-requires
perl-test-requiresinternet
perl-test-warn
perl-test-warnings
perl-text-csv
perl-text-diff
perl-text-format
perl-text-simpletable
perl-text-soundex
perl-text-unidecode
perl-time-hires
perl-time-piece
perl-try-tiny
perl-uri
perl-uri-escape
perl-version
perl-want
perl-www-robotrules
perl-xml-parser
perl-xml-parser-lite
perl-xml-simple
perl-yaml
perl-yaml-libyaml
petsc	petsc: fix suitesparse configure options. (#11188)	2019-04-19 11:44:05 -07:00
pexsi
pfft
pflotran	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
pfunit
pgdspider
pgi
pgmath
phantompeakqualtools
phast
phasta
phist
phrap-crossmatch-swat
phred
phylip
phyluce
picard	picard package: Add version 2.19.0 (#11018)	2019-04-02 17:01:17 -07:00
picsar
picsarlite
pidx
pigz
pilon
pindel
piranha
pism
pixman	pixman: fix patch (#11173)	2019-04-15 14:49:02 +02:00
pkg-config
pkgconf
planck-likelihood
plasma	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
platypus
plink
plplot
plumed
pmdk	add PMDK 1.6	2019-05-02 03:37:22 +09:00
pmgr-collective
pmix
pnfft
pngwriter
pnmpi
poamsa
pocl
polymake
poppler
poppler-data
porta
portage
portcullis
postgresql
ppl
pplacer
prank
precice	precice: add version 1.4.1 (#11276)	2019-04-26 09:49:11 +02:00
presentproto
preseq
price
primer3
prinseq-lite
printproto
prng
probconsrna
prodigal
proj	proj package: add versions 5.2.0 and 5.1.0 (#11079)	2019-04-02 18:18:56 -07:00
protobuf
proxymngr
pruners-ninja
ps-lite
psi4
pslib
psm
psmc
pstreams
pugixml
pumi	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
pv
pvm
pxz
py-3to2
py-4suite-xml
py-abipy
py-adios
py-advancedhtmlparser
py-affine
py-alabaster
py-alembic
py-apache-libcloud
py-apipkg
py-appdirs
py-appnope
py-apscheduler
py-argcomplete
py-argparse
py-ase
py-asn1crypto
py-astroid
py-astropy
py-async-generator
py-atomicwrites
py-attrs
py-autopep8
py-avro
py-avro-json-serializer
py-babel
py-backcall
py-backports-abc
py-backports-functools-lru-cache
py-backports-shutil-get-terminal-size
py-backports-ssl-match-hostname
py-basemap	fixes py-basemap package (#11104)	2019-04-05 11:27:23 -07:00
py-bcbio-gff
py-beautifulsoup4
py-binwalk
py-biom-format
py-biomine
py-biopython
py-bitarray
py-bitstring
py-black
py-bleach
py-blessings
py-bokeh
py-boltons
py-bottleneck
py-breakseq2
py-breathe
py-brian
py-brian2
py-bsddb3
py-bx-python
py-cartopy
py-cclib
py-cdat-lite
py-cdo
py-certifi
py-cffi
py-cftime
py-chardet
py-checkm-genome
py-cheetah
py-click
py-click-plugins
py-cligj
py-cloudpickle
py-cogent
py-colorama
py-colormath
py-configparser
py-counter
py-coverage
py-cpuinfo
py-crispresso
py-crossmap
py-cryptography
py-csvkit
py-current
py-cutadapt
py-cvxopt
py-cycler
py-cython
py-dask
py-dateutil	py-dateutil: add missing dependency on py-setuptools-scm (#11282)	2019-04-26 20:28:35 +09:00
py-dbf
py-decorator
py-deeptools	py-deeptools: adding release 3.2.1 sha256 sum (#11174)	2019-04-12 09:45:04 +02:00
py-dendropy
py-descartes
py-dill
py-discover
py-dlcpar
py-docopt
py-docutils
py-doxypy
py-doxypypy
py-dryscrape
py-dxchange
py-dxfile
py-easybuild-easyblocks
py-easybuild-easyconfigs
py-easybuild-framework
py-edffile
py-editdistance
py-elasticsearch
py-elephant
py-emcee
py-entrypoints
py-enum34
py-epydoc
py-espresso	py-espresso: added v4.0.2	2019-05-03 10:40:54 +09:00
py-espressopp
py-et-xmlfile
py-eventlet
py-execnet
py-fastaindex
py-fasteners
py-faststructure
py-filelock
py-fiona
py-fiscalyear
py-flake8
py-flake8-polyfill
py-flask
py-flask-compress
py-flask-socketio
py-flexx
py-fn
py-fparser
py-funcsigs
py-functools32
py-future
py-futures
py-fypp
py-gdbgui
py-genders
py-genshi
py-geopandas
py-gevent
py-git2
py-git-review
py-gnuplot
py-goatools
py-gpaw
py-greenlet
py-griddataformats
py-guidata
py-guiqwt
py-h5glance
py-h5py
py-hdfs
py-hepdata-validator
py-hpccm
py-html2text
py-html5lib
py-htseq
py-httpbin
py-hypothesis
py-idna
py-igraph
py-illumina-utils
py-imageio
py-imagesize
py-iminuit
py-importlib
py-invoke
py-ipaddress
py-ipdb
py-ipykernel
py-ipython
py-ipython-genutils
py-ipywidgets
py-isort
py-itsdangerous
py-jdcal
py-jedi
py-jinja2
py-joblib
py-jprops
py-jpype
py-jsonschema
py-junit-xml
py-jupyter-client
py-jupyter-console
py-jupyter-core
py-jupyter-notebook
py-jupyterhub
py-keras
py-keras-applications
py-keras-preprocessing
py-kiwisolver
py-lark-parser
py-latexcodec
py-lazy
py-lazy-object-proxy
py-lazy-property
py-lazyarray
py-libconf
py-libensemble
py-line-profiler
py-linecache2
py-lit
py-llvmlite
py-lmfit
py-localcider
py-locket
py-lockfile
py-logilab-common
py-lrudict
py-luigi
py-lxml
py-lzstring
py-m2r
py-macholib
py-machotools
py-macs2
py-maestrowf
py-mako
py-mappy
py-markdown
py-markupsafe
py-matplotlib
py-mccabe
py-mdanalysis
py-meep
py-memory-profiler
py-merlin
py-methylcode
py-mg-rast-tools
py-misopy
py-mistune
py-mock
py-modred
py-moltemplate
py-mongo
py-monotonic
py-monty
py-more-itertools
py-mpi4py
py-mpmath
py-multiprocess
py-multiqc
py-munch
py-mx
py-mxnet
py-myhdl
py-mysql-connector
py-mysqldb1
py-natsort
py-nbconvert
py-nbformat
py-neo
py-nestle
py-netcdf4
py-netifaces
py-networkx
py-nose
py-nosexcover
py-numba
py-numexpr
py-numexpr3
py-numpy
py-numpydoc
py-olefile
py-ont-fast5-api
py-openpmd-validator
py-openpyxl
py-openslide-python
py-opentuner
py-ordereddict
py-oset
py-owslib
py-packaging
py-palettable
py-pandas	py-pandas: Add version 0.20.0 (#11264)	2019-04-24 09:01:56 +09:00
py-paramiko
py-partd
py-pathlib2
py-pathos
py-pathspec
py-patsy
py-pbr
py-pep8-naming
py-perf
py-performance
py-periodictable
py-petsc4py	petsc4py: add verson 3.11.0 (#11186)	2019-04-15 09:54:40 +02:00
py-pexpect
py-phonopy
py-pickleshare
py-picrust
py-pil
py-pillow
py-pint
py-pip
py-pipits
py-pkgconfig
py-plotly
py-pluggy
py-ply
py-pmw
py-poster
py-pox
py-ppft
py-prettytable
py-progress
py-projectq
py-prometheus-client
py-prompt-toolkit
py-protobuf
py-psutil
py-psyclone
py-psycopg2
py-ptyprocess
py-pudb
py-py
py-py2bit
py-py2cairo
py-py2neo
py-py4j
py-pyani
py-pyarrow	py-arrow and arrow: add version 0.12.1 (#11004)	2019-04-02 17:00:04 -07:00
py-pyasn1
py-pybigwig
py-pybind11
py-pybtex
py-pybtex-docutils
py-pycairo
py-pychecker
py-pycodestyle
py-pycparser
py-pycrypto
py-pycurl
py-pydatalog
py-pydispatcher
py-pydot
py-pydv	New package: py-pydv (#11313)	2019-05-02 08:28:21 +09:00
py-pyelftools
py-pyepsg
py-pyfaidx
py-pyfasta
py-pyfftw
py-pyflakes
py-pygdbmi
py-pygments
py-pygobject
py-pygpu
py-pygresql
py-pygtk
py-pylint
py-pymatgen
py-pyminifier
py-pymol
py-pympler
py-pymysql
py-pynio
py-pynn
py-pyodbc
py-pypar
py-pyparsing
py-pypeflow
py-pyprof2html
py-pyproj
py-pyqi
py-pyqt
py-pyrad
py-pysam
py-pyscaf
py-pyserial
py-pyshp
py-pyside
py-pysocks
py-pyspark
py-pysqlite
py-pytables
py-pytest
py-pytest-cov
py-pytest-flake8
py-pytest-httpbin
py-pytest-mock
py-pytest-runner
py-pytest-xdist
py-pythia
py-python-daemon
py-python-engineio
py-python-gitlab
py-python-htmlgen
py-python-levenshtein
py-python-socketio
py-pythonqwt
py-pytorch
py-pytz
py-pyutilib
py-pyvcf
py-pywavelets
py-pyyaml
py-qtawesome
py-qtconsole
py-qtpy
py-quantities
py-quast
py-queryablelist
py-radical-utils
py-ranger
py-rasterio
py-readme-renderer
py-regex
py-reportlab
py-requests	py-requests: Add missing dependencies for versions 2.16.0 and up (#10996)	2019-04-10 15:38:28 -07:00
py-requests-toolbelt
py-restview
py-rope
py-rpy2
py-rsa
py-rseqc
py-rtree
py-saga-python
py-scandir
py-scientificpython
py-scikit-image
py-scikit-learn
py-scikit-optimize
py-scipy
py-seaborn
py-send2trash
py-setuptools
py-setuptools-git
py-setuptools-scm
py-sfepy
py-sh
py-shapely
py-shiboken
py-simplegeneric
py-simplejson
py-singledispatch
py-sip
py-six
py-slepc4py
py-slurm-pipeline
py-sncosmo
py-snowballstemmer
py-snuggs
py-spectra
py-spefile
py-spglib
py-sphinx
py-sphinx-bootstrap-theme
py-sphinx-rtd-theme
py-sphinxautomodapi
py-sphinxcontrib-bibtex
py-sphinxcontrib-programoutput
py-sphinxcontrib-websupport
py-spyder
py-spykeutils
py-sqlalchemy
py-statsmodels
py-stevedore
py-storm
py-subprocess32
py-symengine
py-symfit
py-sympy
py-tabulate
py-tappy
py-terminado
py-testinfra
py-tetoolkit
py-theano
py-tifffile
py-toml
py-tomopy
py-toolz
py-tornado
py-tqdm
py-traceback2
py-traitlets
py-treehash
py-tuiview
py-twisted
py-typing
py-tzlocal
py-udunits
py-umi-tools	py-umi-tools: Add latest versions (#11256)	2019-04-23 18:23:44 +09:00
py-unicycler
py-unittest2
py-unittest2py3k
py-urllib3
py-urwid
py-vcversioner
py-virtualenv
py-virtualenv-clone
py-virtualenvwrapper
py-vsc-base
py-vsc-install
py-wcsaxes
py-wcwidth
py-webencodings
py-webkit-server
py-weblogo
py-werkzeug
py-whatshap
py-wheel
py-widgetsnbextension
py-wrapt
py-xarray
py-xattr
py-xdot
py-xenv
py-xlrd
py-xlsxwriter
py-xmlrunner
py-xopen
py-xpyb
py-xvfbwrapper
py-yamlreader
py-yapf
py-yt
py-ytopt
py-zmq
py-zope-event
py-zope-interface
pythia6
python	python: add versions 3.7.3, 3.5.7, and 3.4.10 (#11300)	2019-05-02 08:01:30 +09:00
qbank
qbox
qca
qhull
qjson
qmcpack	QMCPACK: compiler flags and mpi wrapper updates (#11326)	2019-05-03 11:13:19 +09:00
qmd-progress
qorts
qrupdate
qt
qt-creator
qtgraph
qthreads
quantum-espresso	QuantumEspresso package: add version 6.4 (#11302)	2019-04-26 20:25:40 +09:00
quinoa
qwt
r	R: add version 3.6.0	2019-05-02 08:34:00 +09:00
r3d
r-a4
r-a4base
r-a4classif
r-a4core
r-a4preproc
r-a4reporting
r-abadata
r-abaenrichment
r-abind
r-absseq
r-acde
r-acepack
r-acgh
r-acme
r-ada
r-adabag
r-ade4
r-adegenet
r-adsplit
r-aer
r-affxparser
r-affy
r-affycomp
r-affycompatible
r-affycontam
r-affycoretools
r-affydata
r-affyexpress
r-affyilm
r-affyio
r-affypdnn
r-affyplm
r-affyqcreport
r-affyrnadegradation
r-agdex
r-agilp
r-agimicrorna
r-aims
r-aldex2
r-allelicimbalance
r-alpine
r-als
r-alsace
r-altcdfenvs
r-amap
r-ampliqueso
r-analysispageserver
r-anaquin
r-aneufinder
r-aneufinderdata
r-animation
r-annaffy
r-annotate
r-annotationdbi
r-annotationfilter
r-annotationforge
r-annotationhub
r-ape
r-argparse
r-assertthat
r-backports
r-bamsignals
r-base64
r-base64enc
r-bayesm
r-bbmisc
r-beanplot
r-bfast
r-bfastspatial
r-bh
r-biasedurn
r-bibtex
r-bindr
r-bindrcpp
r-biobase
r-biocgenerics
r-biocinstaller
r-biocparallel
r-biocstyle
r-biom-utils
r-biomart
r-biomformat
r-biostrings
r-biovizbase
r-bit
r-bit64
r-bitops
r-blob
r-blockmodeling
r-bookdown
r-boot
r-brew
r-broom
r-bsgenome
r-bumphunter
r-c50
r-cairo
r-callr
r-car
r-caret
r-category
r-catools
r-cdcfluview
r-cellranger
r-checkmate
r-checkpoint
r-chemometrics
r-chron
r-circlize
r-class
r-classint
r-cli
r-clipr
r-cluster
r-clustergeneration
r-clusterprofiler
r-cner
r-coda
r-codetools
r-coin
r-colorspace
r-combinat
r-commonmark	r-commonmark: new package at 1.7 (#11049)	2019-04-02 17:22:42 -07:00
r-complexheatmap
r-compositions
r-convevol
r-corhmm
r-corpcor
r-corrplot
r-covr
r-cowplot
r-crayon
r-crosstalk
r-ctc
r-cubature
r-cubist
r-curl
r-data-table
r-dbi
r-dbplyr
r-delayedarray
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-desc	r-desc: new package at 1.2.0 (#11048)	2019-04-02 17:10:24 -07:00
r-deseq
r-deseq2
r-desolve
r-devtools
r-diagrammer
r-dicekriging
r-dichromat
r-diffusionmap
r-digest
r-diptest
r-dirichletmultinomial
r-dismo
r-diversitree
r-dnacopy
r-do-db
r-domc
r-doparallel
r-dorng
r-dose
r-downloader
r-dplyr
r-dt
r-dtw
r-dygraphs
r-dynamictreecut
r-e1071
r-edger
r-ellipse
r-energy
r-ensembldb
r-ergm
r-evaluate
r-expint
r-expm
r-factoextra
r-factominer
r-fansi
r-fastcluster
r-fastmatch
r-ff
r-fftwtools
r-fgsea
r-filehash
r-findpython
r-fit-models
r-flashclust
r-flexclust
r-flexmix
r-fnn
r-forcats
r-foreach
r-forecast
r-foreign
r-formatr
r-formula
r-fpc
r-fracdiff
r-futile-logger
r-futile-options
r-gamlss
r-gamlss-data
r-gamlss-dist
r-gbm
r-gcrma
r-gdalutils
r-gdata
r-gdsfmt
r-geiger
r-genefilter
r-genelendatabase
r-geneplotter
r-genie3
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-gensa
r-geomorph
r-geoquery
r-geor
r-geosphere
r-getopt
r-getoptlong
r-ggally
r-ggbio
r-ggdendro
r-ggjoy
r-ggmap
r-ggplot2
r-ggpubr
r-ggrepel
r-ggridges
r-ggsci
r-ggvis
r-gistr
r-git2r
r-glimma
r-glmnet
r-globaloptions
r-glue
r-gmodels
r-gmp
r-go-db
r-googlevis
r-goplot
r-gosemsim
r-goseq
r-gostats
r-gplots
r-graph
r-gridbase
r-gridextra
r-gseabase
r-gss
r-gsubfn
r-gtable
r-gtools
r-gtrellis
r-gviz
r-haven
r-hexbin
r-highr
r-hmisc
r-hms
r-hoardr	r-hoardr: new package at 0.5.2 (#11051)	2019-04-02 17:28:05 -07:00
r-htmltable
r-htmltools
r-htmlwidgets
r-httpuv
r-httr
r-hwriter
r-hypergraph
r-ica
r-igraph
r-illuminaio
r-impute
r-influencer
r-inline
r-interactivedisplaybase
r-ipred
r-iranges
r-irdisplay
r-irkernel
r-irlba
r-iso
r-iterators
r-janitor
r-jaspar2018
r-jomo
r-jpeg
r-jsonlite
r-kegg-db
r-kegggraph
r-keggrest
r-kernlab
r-kernsmooth
r-kknn
r-knitr
r-ks
r-labeling
r-lambda-r
r-laplacesdemon
r-lars
r-lattice
r-latticeextra
r-lava
r-lazyeval
r-leaflet
r-leaps
r-learnbayes
r-lhs
r-limma
r-lme4
r-lmtest
r-locfit
r-log4r
r-lpsolve
r-lsei
r-lubridate
r-magic
r-magrittr
r-makecdfenv
r-maldiquant
r-manipulatewidget
r-mapproj
r-maps
r-maptools
r-markdown
r-mass
r-matr
r-matrix
r-matrixmodels
r-matrixstats
r-mclust
r-mcmcglmm
r-mco
r-mda
r-memoise
r-mergemaid
r-methodss3
r-mgcv
r-mgraster
r-mice
r-mime
r-minfi
r-miniui
r-minqa
r-misc3d
r-mitml
r-mixtools
r-mlbench
r-mlinterfaces
r-mlr
r-mlrmbo
r-mmwrweek
r-mnormt
r-modelmetrics
r-modelr
r-modeltools
r-mpm
r-msnbase
r-multcomp
r-multicool
r-multitaper
r-multtest
r-munsell
r-mvtnorm
r-mzid
r-mzr
r-nanotime
r-ncbit
r-ncdf4
r-network
r-networkd3
r-nleqslv
r-nlme
r-nloptr
r-nmf
r-nnet
r-nnls
r-nor1mix
r-nortest
r-np
r-numderiv
r-oligoclasses
r-oo
r-openssl
r-optparse
r-org-hs-eg-db
r-organismdbi
r-packrat
r-pacman
r-paleotree
r-pamr
r-pan
r-parallelmap
r-paramhelpers
r-party
r-partykit
r-pathview
r-pbapply
r-pbdzmq
r-pbkrtest
r-pcamethods
r-pcapp
r-permute
r-pfam-db
r-phangorn
r-phantompeakqualtools
r-phyloseq
r-phytools
r-picante
r-pillar
r-pkgbuild	r-pkgbuild: new package at 1.0.3 (#11046)	2019-04-02 17:09:59 -07:00
r-pkgconfig
r-pkgload	r-pkgload: new package at 1.0.2 (#11047)	2019-04-02 17:21:55 -07:00
r-pkgmaker
r-plogr
r-plot3d
r-plotly
r-plotrix
r-pls
r-plyr
r-pmcmr
r-png
r-popgenome
r-powerlaw
r-prabclus
r-praise
r-preprocesscore
r-prettyunits
r-processx
r-prodlim
r-progress
r-protgenerics
r-proto
r-proxy
r-pryr
r-ps
r-psych
r-ptw
r-purrr
r-quadprog
r-quantmod
r-quantreg
r-quantro
r-qvalue
r-r6
r-randomfields
r-randomfieldsutils
r-randomforest
r-ranger
r-rappdirs
r-raster
r-rbgl
r-rbokeh
r-rcolorbrewer
r-rcpp
r-rcpparmadillo
r-rcppblaze
r-rcppcctz
r-rcppcnpy
r-rcppeigen
r-rcppprogress
r-rcurl
r-rda
r-readr
r-readxl
r-registry
r-rematch
r-reordercluster
r-reportingtools
r-repr
r-reprex
r-reshape
r-reshape2
r-rex
r-rgdal
r-rgenoud
r-rgeos
r-rgl	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
r-rgooglemaps
r-rgraphviz
r-rhdf5
r-rhmmer	r-rhmmer: new package at 0.1.0 (#11050)	2019-04-02 17:25:55 -07:00
r-rhtslib
r-rinside
r-rjags
r-rjava
r-rjson
r-rjsonio
r-rlang
r-rmarkdown
r-rminer
r-rmpfr
r-rmpi
r-rmysql
r-rngtools
r-robust
r-robustbase
r-rocr
r-rodbc
r-rots
r-roxygen2	r-roxygen2 package: added 6.1.1, more dependencies (#11045)	2019-04-02 17:27:04 -07:00
r-rpart
r-rpart-plot
r-rpostgresql
r-rprojroot
r-rrcov
r-rrpp
r-rsamtools
r-rsnns
r-rsolnp
r-rsqlite
r-rstan
r-rstudioapi
r-rtracklayer
r-rtsne
r-runit
r-rvcheck
r-rvest
r-rzmq
r-s4vectors
r-samr
r-sandwich
r-scales
r-scatterplot3d
r-sdmtools
r-segmented
r-selectr
r-seqinr
r-seqlogo
r-seurat
r-sf
r-sfsmisc
r-shape
r-shiny
r-shinydashboard
r-shortread
r-siggenes
r-simpleaffy
r-sm
r-smoof
r-sn
r-snow
r-snowfall
r-snprelate
r-som
r-somaticsignatures
r-sourcetools
r-sp
r-sparsem
r-spatial
r-spdep
r-speedglm
r-spem
r-splancs
r-splitstackshape
r-sqldf
r-squash
r-sseq
r-stanheaders
r-statmod
r-statnet-common
r-stringi
r-stringr
r-strucchange
r-subplex
r-summarizedexperiment
r-survey
r-survival
r-sva
r-tarifx
r-tclust
r-tensora
r-testit
r-testthat
r-tfbstools
r-tfmpvalue
r-th-data
r-threejs
r-tibble
r-tidycensus
r-tidyr
r-tidyselect
r-tidyverse
r-tiff
r-tigris
r-timedate
r-tmixclust
r-topgo
r-trimcluster
r-truncnorm
r-trust
r-tseries
r-tsne
r-ttr
r-udunits2
r-units
r-utf8
r-utils
r-uuid
r-variantannotation
r-varselrf
r-vcd
r-vegan
r-vfs
r-vgam
r-vipor
r-viridis
r-viridislite
r-visnetwork
r-vsn
r-webshot
r-wgcna
r-whisker
r-withr
r-xde
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge
r-xml
r-xml2
r-xnomial
r-xtable
r-xts
r-xvector
r-yaml
r-yapsa
r-yaqcaffy
r-yarn
r-zlibbioc
r-zoo
racon
raft
ragel
raja	raja: add newer versions (#11102)	2019-04-03 12:09:45 -06:00
randfold
random123
randrproto
range-v3	range-v3: New versions 0.3.7, 0.4.0, 0.5.0. (#11358)	2019-05-03 09:13:50 +02:00
rankstr
rapidjson
ravel
raxml
ray
rclone
rdma-core
rdp-classifier
re2c
readfq
readline
recordproto
redis
redset
redundans
regcm
relax
relion
rempi
rename
rendercheck
renderproto
repeatmasker
resourceproto
revbayes
rgb
rhash
rlwrap
rmats
rmlab
rna-seqc
rngstreams
rocksdb
rockstar
root	root: new versions, variants and patches (#11215)	2019-04-24 08:48:52 +02:00
rose
ross	ross package: add version 7.0.1 (#11078)	2019-04-02 17:50:41 -07:00
routino
rpcsvc-proto
rr
rsbench
rsem
rstart
rsync
rtags
rtax
ruby	ruby: Install certificate for +openssl only (#11184)	2019-04-17 13:03:58 -05:00
ruby-gnuplot
ruby-narray
ruby-ronn
ruby-rubyinline
ruby-svn2git
ruby-terminal-table
rust	Added rust 1.34.0 (#11200)	2019-04-16 18:32:11 -05:00
rust-bindgen
sabre
saga-gis
sailfish
salmon
sambamba
samblaster
samrai
samtools
sandbox
sas
satsuma2
savanna
saws
sbt
scala
scalasca
scallop
scalpel
scan-for-matches
scons
scorec-core
scorep
scotch
scr
screen
scripts
scrnsaverproto
sctk
sdl2
sdl2-image
sdsl-lite
seacas
sed
sentieon-genomics
seqan
seqprep
seqtk
serf
sessreg
setxkbmap
sga
shapeit
shared-mime-info
shiny-server
shocklibs
shoremap
shortbred
shortstack
showfont
shuffile
sickle
siesta
signalp
signify
silo
simgrid
simplemoc
simul
simulationio
singularity	Singularity package: new version, legacy builds, and root permissions (#11094)	2019-05-03 10:27:13 +09:00
singularity-legacy	Singularity package: new version, legacy builds, and root permissions (#11094)	2019-05-03 10:27:13 +09:00
skilion-onedrive
slate
sleef
slepc	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
slurm
smalt
smproxy
snakemake
snap
snap-berkeley
snap-korf
snappy
snbone
sniffles
snpeff
snphylo
snptest
soap2
soapdenovo2
soapdenovo-trans
soapindel
soapsnp
sofa-c
somatic-sniper
sortmerna
sosflow
sowing
sox
spades
span-lite
spark
sparsehash
sparta
spdlog
spectrum-mpi
speex
spglib
sph2pipe
spherepack
spindle
spm
spot
sqlite
sqlitebrowser
squashfs	squashfs should depend_on('zlib') (#11265)	2019-04-24 09:01:36 +09:00
squid
sra-toolkit	sra-toolkit new version (#11111)	2019-04-08 08:56:49 +02:00
ssht
sspace-longread
sspace-standard
sst-core
sst-dumpi
sst-macro
stacks
staden-io-lib
star
star-ccm-plus
startup-notification
stat
stata
stc
steps
stow
strace
stream
strelka
stress
string-view-lite
stringtie
structure
strumpack	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
sublime-text	sublime-text: Miscellaneous improvements (#11154)	2019-04-17 13:44:34 -07:00
subread
subversion
suite-sparse	[WIP] CEED 2.0 (#10903)	2019-04-17 17:37:41 -07:00
sumaclust
sundials
superlu
superlu-dist	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
superlu-mt
supernova	Supernova package: add version 2.1.1 (#11285)	2019-05-01 09:56:53 +09:00
sw4lite
swap-assembler
swarm
swfft
swiftsim
swig
symengine
sympol
sz
tabix
talass
talloc
tantan
tar
targetp
task
taskd
tasmanian	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
tassel
tau
tcl
tcl-itcl
tcl-tcllib
tcl-tclxml
tclap
tcoffee
tcptrace
tcsh
tealeaf
templight
templight-tools
tetgen
tethex	remove myself from maintainers of some packages (#11319)	2019-04-30 10:16:53 +02:00
texinfo
texlive
tfel	Add new TFEL' versions (3.0.4, 3.1.4 and 3.2.1). Add new MGIS version (1.0.1). (#11109)	2019-04-08 09:09:14 +02:00
the-platinum-searcher
the-silver-searcher
thornado-mini
thrift
thrust
tig
time
tinyxml
tinyxml2
tioga
tk
tldd
tmalign
tmhmm
tmux
tmuxinator
tophat
tppred
tracer
transabyss
transdecoder
transposome
transset
trapproto
tree
treesub
trf
triangle
trilinos	trilinos: add variant for ShyLU support (#11294)	2019-05-02 03:36:00 +09:00
trilinos-catalyst-ioss-adapter
trimal
trimgalore
trimmomatic
trinity
trinotate
trnascan-se
turbine
turbomole
tut
twm
tycho2
typhon
typhonio
uberftp
ucx
udunits2
ufo-core
ufo-filters
umpire
unblur
uncrustify
unibilium
unifycr
unison
units
unixodbc
unuran
unzip
usearch
util-linux
util-macros	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
uuid
uvw
valgrind
vampirtrace
vardictjava
varscan
vc
vcftools
vcsh
vdt
vecgeom
veclibfort
vegas2
veloc	veloc package: add version 1.1 and update master dependencies (#11270)	2019-05-01 09:44:51 +09:00
velvet
verilator	verilator: Fix FlexLexer.h not found (#11185)	2019-04-15 09:56:07 +02:00
verrou
videoproto
viennarna
viewres
vigra
vim
virtualgl	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
visit
vizglow
vmatch
voropp
votca-csg
votca-ctp
votca-tools
votca-xtp
vpfft
vpic
vsearch
vt
vtk	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
vtkh
vtkm
wannier90
warpx
wcslib
wget	wget: add version 1.20.3 (#11148)	2019-04-09 18:37:04 -05:00
wgsim
windowswmproto
wireshark
wordnet
workrave
wt
wtdbg2
wx
wxpropgrid
x11perf
xapian-core
xauth
xbacklight
xbiff
xbitmaps
xbraid
xcalc
xcb-demo
xcb-proto
xcb-util
xcb-util-cursor
xcb-util-errors
xcb-util-image
xcb-util-keysyms
xcb-util-renderutil
xcb-util-wm	xcb-util-wm: add m4 build system dependency (#11056)	2019-04-04 13:11:02 +02:00
xcb-util-xrm
xclip
xclipboard
xclock
xcmiscproto
xcmsdb
xcompmgr
xconsole
xcursor-themes
xcursorgen
xdbedizzy
xditview
xdm
xdpyinfo
xdriinfo
xedit
xerces-c
xeus
xev
xextproto
xeyes
xf86bigfontproto
xf86dga
xf86dgaproto
xf86driproto
xf86miscproto
xf86rushproto
xf86vidmodeproto
xfd
xfindproxy
xfontsel
xfs
xfsinfo
xfwp
xgamma
xgboost
xgc
xhmm
xhost
xineramaproto
xinit
xinput
xios
xkbcomp
xkbdata
xkbevd
xkbprint
xkbutils
xkeyboard-config	new package: kitty terminal (#9621)	2019-04-18 08:53:52 +02:00
xkill
xload
xlogo
xlsatoms
xlsclients
xlsfonts
xmag
xman
xmessage
xmh
xmlf90
xmlto
xmodmap
xmore
xorg-cf-files
xorg-docs
xorg-gtest
xorg-server	mesa: re-written to new meson build system (#10482)	2019-05-01 17:57:33 -05:00
xorg-sgml-doctools
xphelloworld
xplor-nih
xplsprinters
xpr
xprehashprinterlist
xprop
xproto
xproxymanagementprotocol
xqilla
xrandr
xrdb
xrefresh
xrootd
xrx
xsbench
xscope
xsd
xsdk	xsdk: add/update maintainers to xsdk packages (#11146)	2019-04-18 08:20:22 -05:00
xsdktrilinos
xset
xsetmode
xsetpointer
xsetroot
xsimd
xsm
xstdcmap
xtensor
xtensor-python
xterm
xtl
xtrans
xtrap
xts
xvidtune
xvinfo
xwd
xwininfo
xwud
xxhash
xz
yajl
yambo
yaml-cpp
yara
yasm
yorick
z3
zeromq
zfp	zfp: Add 0.5.4 (#11016)	2019-04-08 09:11:28 +02:00
zip
zlib
zoltan
zsh
zstd	zstd: Add 1.4.0 (#11208)	2019-04-17 09:29:52 -05:00