33 lines
1.4 KiB
Python
33 lines
1.4 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RIlluminahumanmethylation450kannoIlmn12Hg19(RPackage):
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"""Annotation for Illumina's 450k methylation arrays.
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Manifests and annotation for Illumina's 450k array data."""
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# This package is available via bioconductor but there is no available git
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# repository.
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bioc = "IlluminaHumanMethylation450kanno.ilmn12.hg19"
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url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz"
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version(
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"0.6.1",
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url="https://bioconductor.org/packages/3.15/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.1.tar.gz",
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sha256="3627d75a6303f4d307fa6daf0c5afd57649c60a268b3d4be7e8ac8edc4b1e288",
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)
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version(
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"0.6.0",
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url="https://bioconductor.org/packages/3.4/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz",
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sha256="249b8fd62add3c95b5047b597cff0868d26a98862a47cebd656edcd175a73b15",
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)
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depends_on("r@3.3.0:", type=("build", "run"))
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depends_on("r@3.5.0:", type=("build", "run"), when="@0.6.1:")
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depends_on("r-minfi@1.19.15:", type=("build", "run"))
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