58 lines
2.2 KiB
Python
58 lines
2.2 KiB
Python
##############################################################################
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# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Bucky(MakefilePackage):
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"""BUCKy is a free program to combine molecular data from multiple loci.
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BUCKy estimates the dominant history of sampled individuals, and how
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much of the genome supports each relationship, using Bayesian
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concordance analysis."""
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homepage = "http://www.stat.wisc.edu/~ane/bucky/index.html"
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url = "http://dstats.net/download/http://www.stat.wisc.edu/~ane/bucky/v1.4/bucky-1.4.4.tgz"
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version('1.4.4', 'f0c910dd1d411d112637826519943a6d')
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# Compilation requires gcc
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conflicts('%cce')
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conflicts('%clang')
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conflicts('%intel')
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conflicts('%nag')
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conflicts('%pgi')
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conflicts('%xl')
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conflicts('%xl_r')
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build_directory = 'src'
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def install(self, spec, prefix):
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with working_dir('src'):
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mkdirp(prefix.bin)
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install('bucky', prefix.bin)
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install('mbsum', prefix.bin)
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install_tree('data', prefix.data)
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install_tree('doc', prefix.doc)
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install_tree('scripts', prefix.scripts)
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