eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
29 lines
1000 B
Python
29 lines
1000 B
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Trimgalore(Package):
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"""Trim Galore! is a wrapper around Cutadapt and FastQC to consistently
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apply adapter and quality trimming to FastQ files, with extra
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functionality for RRBS data."""
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homepage = "https://github.com/FelixKrueger/TrimGalore"
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url = "https://github.com/FelixKrueger/TrimGalore/archive/0.4.4.tar.gz"
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version('0.4.5', 'c71756042b2a65c34d483533a29dc206')
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version('0.4.4', 'aae1b807b48e38bae7074470203997bb')
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depends_on('perl', type=('build', 'run'))
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depends_on('py-cutadapt', type=('build', 'run'))
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depends_on('fastqc')
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def install(self, spec, prefix):
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filter_file(r'#!/usr/bin/perl', '#!/usr/bin/env perl', 'trim_galore')
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mkdirp(prefix.bin)
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install('trim_galore', prefix.bin)
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