42 lines
1.9 KiB
Python
42 lines
1.9 KiB
Python
##############################################################################
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# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Satsuma2(CMakePackage):
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"""Satsuma2 is an optimsed version of Satsuma, a tool to reliably align
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large and complex DNA sequences providing maximum sensitivity (to find
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all there is to find), specificity (to only find real homology) and
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speed (to accomodate the billions of base pairs in vertebrate genomes).
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"""
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homepage = "https://github.com/bioinfologics/satsuma2"
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git = "https://github.com/bioinfologics/satsuma2.git"
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version('2016-11-22', commit='da694aeecf352e344b790bea4a7aaa529f5b69e6')
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def install(self, spec, prefix):
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install_tree(join_path('spack-build', 'bin'), prefix.bin)
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