a8ccb8e116
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
25 lines
932 B
Python
25 lines
932 B
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Stringtie(MakefilePackage):
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"""StringTie is a fast and highly efficient assembler of RNA-Seq alignments
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into potential transcripts."""
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homepage = "https://ccb.jhu.edu/software/stringtie"
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url = "https://github.com/gpertea/stringtie/archive/v1.3.3b.tar.gz"
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version('1.3.4d', sha256='0134c0adc264efd31a1df4301b33bfcf3b3fe96bd3990ce3df90819bad9af968')
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version('1.3.4a', sha256='6164a5fa9bf8807ef68ec89f47e3a61fe57fa07fe858f52fb6627f705bf71add')
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version('1.3.3b', sha256='30e8a3a29b474f0abeef1540d9b4624a827d8b29d7347226d86a38afea28bc0f')
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depends_on('samtools')
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install('stringtie', prefix.bin)
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