26 lines
805 B
Python
26 lines
805 B
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class PyMethylcode(PythonPackage):
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"""MethylCoder is a single program that takes of bisulfite-treated
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reads and outputs per-base methylation data. """
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homepage = "https://github.com/brentp/methylcode"
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url = "https://github.com/brentp/methylcode/archive/master.zip"
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version('1.0.0', 'd0ba07c1ab2c74adddd1b23f8e5823e7')
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depends_on('python@2.7.0:2.7.999')
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depends_on('py-six')
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depends_on('py-setuptools')
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depends_on('py-numpy')
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depends_on('py-pyparsing')
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depends_on('py-pyfasta')
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depends_on('py-bsddb3')
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depends_on('bowtie')
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