31 lines
1.3 KiB
Python
31 lines
1.3 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RAffyilm(RPackage):
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"""Linear Model of background subtraction and the Langmuir isotherm.
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affyILM is a preprocessing tool which estimates gene expression levels
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for Affymetrix Gene Chips. Input from physical chemistry is employed to
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first background subtract intensities before calculating concentrations
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on behalf of the Langmuir model."""
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homepage = "https://bioconductor.org/packages/affyILM"
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git = "https://git.bioconductor.org/packages/affyILM.git"
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version('1.36.0', commit='619ced931ba72860ce4cb41c841bbca1636a1132')
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version('1.34.0', commit='2c02ed2d8fa9a9585d41cf4db0b75d0a07ad8564')
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version('1.32.0', commit='860f2ddada80435d309ba334eff3fab503817755')
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version('1.30.0', commit='c07d91ae52a2a48f0a5f212c3ecf3243741bee13')
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version('1.28.0', commit='307bee3ebc599e0ea4a1d6fa8d5511ccf8bef7de')
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depends_on('r@2.10.0:', type=('build', 'run'))
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depends_on('r-gcrma', type=('build', 'run'))
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depends_on('r-affxparser@1.16.0:', type=('build', 'run'))
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depends_on('r-affy', type=('build', 'run'))
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depends_on('r-biobase', type=('build', 'run'))
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