25 lines
991 B
Python
25 lines
991 B
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RGoseq(RPackage):
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"""Detects Gene Ontology and/or other user defined categories which are
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over/under represented in RNA-seq data"""
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homepage = "https://bioconductor.org/packages/release/bioc/html/goseq.html"
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git = "https://git.bioconductor.org/packages/goseq.git"
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version('1.32.0', commit='32fcbe647eea17d7d0d7a262610811502c421d36')
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depends_on('r@3.5.0:3.5.9', when='@1.32.0:', type=('build', 'run'))
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depends_on('r-biasedurn', type=('build', 'run'))
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depends_on('r-genelendatabase@1.9.2:', type=('build', 'run'))
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depends_on('r-mgcv', type=('build', 'run'))
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depends_on('r-annotationdbi', type=('build', 'run'))
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depends_on('r-go-db', type=('build', 'run'))
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depends_on('r-biocgenerics', type=('build', 'run'))
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