30 lines
983 B
Python
30 lines
983 B
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Butter(Package):
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"""butter: Bowtie UTilizing iTerative placEment of Repetitive small rnas.
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A wrapper for bowtie to produce small RNA-seq alignments where
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multimapped small RNAs tend to be placed near regions of confidently
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high density."""
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homepage = "https://github.com/MikeAxtell/butter"
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url = "https://github.com/MikeAxtell/butter/archive/v0.3.3.tar.gz"
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license("GPL-3.0-only")
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version("0.3.3", sha256="862cbe06d51fdefca18e5fe4cfa8e4df6ce92686ccbc389affe05b199ea9243b")
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depends_on("perl", type=("build", "run"))
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depends_on("samtools")
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depends_on("bowtie")
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install("butter", prefix.bin)
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install("bam2wig", prefix.bin)
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