37 lines
1.2 KiB
Python
37 lines
1.2 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Fastqvalidator(MakefilePackage):
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"""The fastQValidator validates the format of fastq files."""
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homepage = "https://genome.sph.umich.edu/wiki/FastQValidator"
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git = "https://github.com/statgen/fastQValidator.git"
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version("2017-01-10", commit="6d619a34749e9d33c34ef0d3e0e87324ca77f320")
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resource(
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name="libStatGen",
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git="https://github.com/statgen/libStatGen.git",
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commit="9db9c23e176a6ce6f421a3c21ccadedca892ac0c",
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)
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depends_on("zlib-api", type="link")
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patch("chromosome.patch", when="@2017-01-10", working_dir="libStatGen")
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@property
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def build_targets(self):
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return ["LIB_PATH_GENERAL={0}".format(join_path(self.stage.source_path, "libStatGen"))]
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@property
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def install_targets(self):
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return [
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"INSTALLDIR={0}".format(self.prefix.bin),
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"LIB_PATH_GENERAL={0}".format(join_path(self.stage.source_path, "libStatGen")),
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"install",
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]
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