47 lines
1.3 KiB
Python
47 lines
1.3 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Aragorn(Package):
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"""ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide
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sequences."""
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homepage = "http://mbio-serv2.mbioekol.lu.se/ARAGORN"
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url = "http://www.ansikte.se/ARAGORN/Downloads/aragorn1.2.41.c"
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version(
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"1.2.41",
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sha256="92a31cc5c0b0ad16d4d7b01991989b775f07d2815df135fe6e3eab88f5e97f4a",
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expand=False,
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)
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version(
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"1.2.38",
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sha256="28aae803d191524b038da582c62c92f190c1925ec69beda56bc21310d8ece522",
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expand=False,
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)
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version(
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"1.2.36",
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sha256="16e5283d890ff74e52e885c9c34b1c2ba2de72770631122e9178079cd06ea8d2",
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expand=False,
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)
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# fix checksum error
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def url_for_version(self, version):
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return f"http://www.ansikte.se/ARAGORN/Downloads/aragorn{version}.c"
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def install(self, spec, prefix):
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cc = Executable(spack_cc)
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cc(
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"-O3",
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"-ffast-math",
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"-finline-functions",
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"-oaragorn",
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"aragorn" + format(spec.version.dotted) + ".c",
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)
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mkdirp(prefix.bin)
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install("aragorn", prefix.bin)
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