27 lines
1.0 KiB
Python
27 lines
1.0 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyMxfold2(PythonPackage):
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"""MXfold2: RNA secondary structure prediction using deep
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learning with thermodynamic integration"""
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homepage = "https://github.com/keio-bioinformatics/mxfold2"
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url = "https://github.com/keio-bioinformatics/mxfold2/releases/download/v0.1.1/mxfold2-0.1.1.tar.gz"
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maintainers = ["dorton21"]
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version("0.1.1", sha256="9f39c6ff4138212d1ad2639005f5c05ffb4df0f7e22f5e7ad49466a05aa047e5")
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depends_on("python@3.7:", type=("build", "run"))
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depends_on("py-torch@1.7:~valgrind", type=("build", "run"))
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depends_on("py-torchvision", type=("build", "run"))
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depends_on("py-wheel@0.35.1:0.36.0", type=("build", "run"))
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depends_on("py-setuptools", type="build")
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depends_on("py-setuptools-cpp", type="build")
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depends_on("cmake", type="build")
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