32 lines
1.3 KiB
Python
32 lines
1.3 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RBiocsingular(RPackage):
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"""Singular Value Decomposition for Bioconductor Packages.
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Implements exact and approximate methods for singular value
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decomposition and principal components analysis, in a framework that
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allows them to be easily switched within Bioconductor packages or
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workflows. Where possible, parallelization is achieved using the
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BiocParallel framework."""
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homepage = "https://bioconductor.org/packages/BiocSingular"
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git = "https://git.bioconductor.org/packages/BiocSingular.git"
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version('1.0.0', commit='d2b091c072d0312698c9bb6611eb1bdf8aebf833')
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depends_on('r-biocgenerics', type=('build', 'run'))
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depends_on('r-s4vectors', type=('build', 'run'))
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depends_on('r-matrix', type=('build', 'run'))
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depends_on('r-delayedarray', type=('build', 'run'))
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depends_on('r-biocparallel', type=('build', 'run'))
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depends_on('r-irlba', type=('build', 'run'))
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depends_on('r-rsvd', type=('build', 'run'))
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depends_on('r-rcpp', type=('build', 'run'))
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depends_on('r-beachmat', type=('build', 'run'))
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