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Todd Gamblin d7847ff768 Use just one flake8 file; mark package.py files to avoid E501 w/url.
2016-05-11 01:16:41 -07:00
..
activeharmony
…
adept-utils
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adol-c
Fixes to installation with OpenMP (tested) and execution of test-suite
2016-05-02 11:01:14 +02:00
antlr
nco: Added new package
2016-05-06 17:42:42 -04:00
apex
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apr
+ Provide basic instructions for providing subversion w/o additional language bindings.
2016-03-30 09:33:00 -06:00
apr-util
+ Provide basic instructions for providing subversion w/o additional language bindings.
2016-03-30 09:33:00 -06:00
arpack
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arpack-ng
arpack-ng needs an extra libtoolize to build.
2016-03-30 23:33:57 -07:00
asciidoc
…
astyle
astyle: fix installation of the binary
2016-04-26 09:18:39 +02:00
atk
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atlas
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atop
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autoconf
missing dependencies (m4) added for netcdf and autoconf
2016-05-02 14:31:02 +02:00
automaded
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automake
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bash
Add bash package
2016-04-06 15:57:03 -05:00
bbcp
Build and install BBCP
2016-05-05 10:58:24 -04:00
bear
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bib2xhtml
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binutils
Disable -Werror
2016-05-05 21:11:54 -04:00
bison
add missing m4 dependency to bison
2016-05-09 14:02:41 +02:00
blitz
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boost
Add changes that remove unsupported libraries from the boost build libraries list based on the boost version numbers. Libraries that are removed include: log - for versions of boost 1.53.0 and older - :atomic - for versions of boost 1.52.0 and older - :locale for versions of boost 1.49.0 and older - :chrono - for versions of boost 1.48.0 and older - and :random - for versions of boost 1.44.0 and older.
2016-04-04 10:33:03 -07:00
bowtie2
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boxlib
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bzip2
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cairo
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caliper
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callpath
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cblas
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cbtf
Update the main Krell Institute and Argo Navis Tech. packages for MPI variant support, get source from github not sourceforge, tested external package usage, and general package clean-up
2016-04-18 16:46:15 -07:00
cbtf-argonavis
Update the main Krell Institute and Argo Navis Tech. packages for MPI variant support, get source from github not sourceforge, tested external package usage, and general package clean-up
2016-04-18 16:46:15 -07:00
cbtf-krell
Update the main Krell Institute and Argo Navis Tech. packages for MPI variant support, get source from github not sourceforge, tested external package usage, and general package clean-up
2016-04-18 16:46:15 -07:00
cbtf-lanl
Update the main Krell Institute and Argo Navis Tech. packages for MPI variant support, get source from github not sourceforge, tested external package usage, and general package clean-up
2016-04-18 16:46:15 -07:00
cereal
Create lib directory
2016-04-17 06:50:15 +02:00
cfitsio
…
cgal
…
cgm
…
cityhash
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cleverleaf
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cloog
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cmake
+ Add CMake version 3.5.2. (#787)
2016-04-17 07:11:19 +02:00
cmocka
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cnmem
Updated docstring
2016-05-02 15:53:43 -07:00
coreutils
…
cppcheck
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cram
…
cryptopp
add support for crypto version 5.6.1
2016-05-06 14:14:13 -07:00
cscope
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cube
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cuda
Change variant defaults and add comment
2016-03-31 11:04:29 -05:00
curl
…
czmq
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dakota
…
damselfly
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dbus
dbus: Added missing dependency (expat)
2016-04-03 21:42:09 -04:00
dealii
dealii: fix a bug where P4EST_DIR was unconditionally requested
2016-05-02 18:53:13 +02:00
dia
+ On some systems, Dia also requires intltool. (#768)
2016-04-17 07:15:47 +02:00
docbook-xml
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doxygen
doxygen: add missing dependencies
2016-03-30 13:28:33 +02:00
dri2proto
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dtcmp
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dyninst
Add release 9.1.0 recognition to the Dyninst API package file.
2016-04-04 11:23:51 -07:00
eigen
Fix: Add missing dependencies for gmp and eigen (#830)
2016-04-26 10:01:09 -07:00
elfutils
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elk
Also install species directory
2016-04-14 10:18:06 -05:00
elpa
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emacs
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environment-modules
Fixed up to work on a machine without any system-install tcl.
2016-04-03 21:38:29 -04:00
espresso
Can install espresso on OS/X
2016-03-31 10:16:40 +01:00
exodusii
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expat
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extrae
…
exuberant-ctags
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fftw
more succinctly
2016-05-04 23:53:10 +02:00
fish
…
flex
Update Flex to 2.6.0
2016-05-04 20:27:58 -04:00
fltk
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flux
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fontconfig
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freetype
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gasnet
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gcc
Add latest version of GCC
2016-05-03 15:58:14 -05:00
gdal
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gdb
Added gdb 7.11
2016-05-09 22:32:46 +02:00
gdk-pixbuf
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geos
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gettext
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gflags
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ghostscript
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git
Update git (#819)
2016-04-23 12:18:58 -07:00
gl2ps
…
glib
glib: add missing dependencies
2016-04-29 09:05:54 +02:00
glm
Add missing dependency for glm
2016-04-30 12:11:10 +02:00
global
+ Global requires ncurses.
2016-04-05 11:53:37 -06:00
glog
…
glpk
…
gmp
Fix: Add missing dependencies for gmp and eigen (#830)
2016-04-26 10:01:09 -07:00
gmsh
GMsh: Fix binary linking against its own libraries
2016-05-09 14:23:07 +02:00
gnuplot
…
gnutls
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googletest
Removed googletest FIXME...
2016-03-29 17:26:34 -04:00
gperf
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gperftools
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graphlib
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graphviz
+ Fix variant description.
2016-03-30 14:27:23 -06:00
gromacs
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gsl
…
gtkplus
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harfbuzz
…
hdf
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hdf5
Merge pull request #812 from eschnett/eschnett/hdf5-check-install
2016-05-10 01:34:10 -07:00
hoomd-blue
Change variant defaults and add comment
2016-03-31 11:04:29 -05:00
hpx5
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hwloc
Update hwloc to 1.11.3
2016-04-26 15:29:16 -04:00
hydra
Add hydra package
2016-05-02 11:06:33 -05:00
hypre
minor fixes to hypre and muparser on Linux
2016-03-29 10:05:08 +02:00
icu
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icu4c
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ImageMagick
Use just one flake8 file; mark package.py files to avoid E501 w/url.
2016-05-11 01:16:41 -07:00
intltool
+ On some systems, Dia also requires intltool. (#768)
2016-04-17 07:15:47 +02:00
ior
Change homepage, explicitly disable
2016-04-24 17:14:33 -05:00
ipopt
Add ipopt v3.12.4 package.
2016-04-01 18:37:08 -07:00
isl
…
jdk
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jemalloc
Update to version 4.1.0 (#785)
2016-04-17 07:12:52 +02:00
jpeg
Add latest jpeg version
2016-05-02 11:17:38 -05:00
judy
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julia
Correct version dependency for OpenBLAS patch
2016-04-09 09:58:48 -04:00
kealib
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kripke
Kripke variants.
2016-05-10 00:31:06 -07:00
launchmon
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lcms
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leveldb
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libarchive
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libcerf
…
libcircle
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libdrm
+ libdrm depends_on libpciaccess. Use spack provided libpciaccess.
2016-03-30 21:18:04 -06:00
libdwarf
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libedit
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libelf
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libevent
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libffi
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libgcrypt
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libgd
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libgpg-error
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libjpeg-turbo
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libjson-c
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libmng
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libmonitor
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libNBC
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libpciaccess
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libpng
Fix compile issues with new libpng versions and qt3 builds by using an older version of libpng. In libpng, make older versions available.
2016-04-13 15:00:45 -07:00
libsigsegv
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libsodium
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libtermkey
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
libtiff
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libtool
libtool: add a missing dependency
2016-05-03 15:15:55 +02:00
libunwind
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libuuid
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libuv
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
libvterm
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
libxc
Add elk package
2016-04-11 16:28:30 -05:00
libxcb
libxcb: add missing dependencies
2016-04-29 09:06:15 +02:00
libxml2
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libxshmfence
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libxslt
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llvm
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llvm-lld
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lmdb
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lmod
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lua
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LuaJIT
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
lwgrp
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lwm2
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m4
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matio
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mbedtls
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memaxes
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mesa
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metis
metis: fix OS X install (#764)
2016-04-17 07:15:07 +02:00
mfem
MFEM version 3.1 (#749)
2016-04-26 10:00:24 -07:00
Mitos
qa : this should still fail due to F821
2016-05-10 19:20:26 +02:00
mpc
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mpe2
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mpfr
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mpibash
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mpich
add pmi support and process managers to the MPIs
2016-05-06 15:15:40 -07:00
mpileaks
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mrnet
added git commit for clang support
2016-05-04 16:38:43 -07:00
msgpack-c
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
mumps
metis 4.0.3
2016-04-06 15:49:59 -07:00
munge
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muparser
minor fixes to hypre and muparser on Linux
2016-03-29 10:05:08 +02:00
muster
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mvapich2
mpi: move mpicc/mpicxx/mpifc/mpif77 to setup_dependent_package()
2016-05-05 10:24:32 +02:00
nasm
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nccmp
Tweak nccmp to be more spack-compatible.
2016-05-10 01:07:34 -07:00
ncdu
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nco
nco: Added new package
2016-05-06 17:42:42 -04:00
ncurses
Add bash package
2016-04-06 15:57:03 -05:00
ncview
Added package: NCView (#791)
2016-04-23 12:15:53 -07:00
ndiff
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netcdf
Remove hdf5 ~cxx constraint on netcdf
2016-05-03 13:28:38 -05:00
netcdf-cxx
Fixed evil non-ASCII quotes
2016-04-03 00:10:22 -04:00
netcdf-cxx4
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netcdf-fortran
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netgauge
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netlib-lapack
+ I am resubmitting this proposed change because it was accidentally
2016-04-06 09:52:09 -06:00
netlib-scalapack
Require cmake
2016-04-04 19:40:05 -04:00
nettle
…
ninja
ninja: fix installation on OS X
2016-03-30 16:17:52 -04:00
numdiff
+ For darwin, add a dependency on gettext. This change was recommended in the discussion for PR#601.
2016-03-30 15:40:04 -06:00
oce
oce: fix bugs related to NULL pointers and compiler optimisation
2016-03-31 13:36:28 +02:00
octave
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ompss
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ompt-openmp
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opari2
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openblas
Merge pull request #845 from davydden/openblas_cleanup_unit_test
2016-05-10 01:28:49 -07:00
opencv
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openjpeg
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openmpi
openmpi : fixes #920, added sqlite as a dependency
2016-05-10 09:02:16 +02:00
openspeedshop
Update the main Krell Institute and Argo Navis Tech. packages for MPI variant support, get source from github not sourceforge, tested external package usage, and general package clean-up
2016-04-18 16:46:15 -07:00
openssl
Add latest OpenSSL versions
2016-05-03 15:44:23 -05:00
osu-micro-benchmarks
Add OSU Micro-Benchmarks package (#822)
2016-04-23 13:29:47 -07:00
otf
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otf2
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p4est
Merge pull request #893 from davydden/mpi_dependent_env
2016-05-05 01:40:11 -07:00
pango
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papi
Make PAPI build on Darwin (#772)
2016-04-17 07:14:34 +02:00
paradiseo
Add extra dependencies for Paradiseo.
2016-04-30 22:25:14 +02:00
parallel-netcdf
1. Added variants to choose language interfaces. 2. Now produces relocatable code (+fpic) by default
2016-04-16 00:57:57 -04:00
paraver
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paraview
paraview: use internal hdf5
2016-04-08 15:09:02 -04:00
parmetis
metis 4.0.3
2016-04-06 15:49:59 -07:00
parpack
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patchelf
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pcre
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pcre2
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pdt
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petsc
metis 4.0.3
2016-04-06 15:49:59 -07:00
pidx
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pixman
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pkg-config
pkg-config: use the internal glib
2016-04-08 12:01:28 -04:00
pmgr_collective
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postgresql
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ppl
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proj
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protobuf
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py-argcomplete
Add argcomplete python package
2016-05-02 11:16:29 -05:00
py-astropy
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py-basemap
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py-biopython
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py-blessings
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py-bottleneck
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
py-cffi
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py-coverage
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py-csvkit
Reformat the description.
2016-04-24 18:06:51 -05:00
py-cython
…
py-dask
Add missing dependency on py-setuptools for
2016-04-04 19:23:48 -05:00
py-dateutil
Add version 2.5.2.
2016-03-30 11:16:11 -05:00
py-dbf
Reformat the description.
2016-04-24 18:06:51 -05:00
py-decorator
Add missing dependency on py-setuptools for
2016-04-04 19:23:48 -05:00
py-epydoc
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py-funcsigs
…
py-genders
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py-gnuplot
…
py-h5py
…
py-ipython
…
py-jdcal
Reformat the description.
2016-04-24 18:06:51 -05:00
py-lockfile
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py-mako
…
py-matplotlib
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
py-mock
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py-mpi4py
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py-mpmath
Added version 1.0 of sympy. Beginning with this version, sympy requires
2016-04-02 15:50:20 -05:00
py-mx
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py-mysqldb1
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py-netcdf
…
py-networkx
New package - py-networkx (https://networkx.github.io/).
2016-04-04 14:02:55 -05:00
py-nose
Add version 1.3.7.
2016-03-30 11:16:35 -05:00
py-numexpr
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
py-numpy
Added version 1.11.0.
2016-03-30 11:21:17 -05:00
py-openpyxl
Reformat the description.
2016-04-24 18:06:51 -05:00
py-pandas
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
py-pbr
…
py-periodictable
…
py-pexpect
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py-phonopy
…
py-pil
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py-pillow
py-pillow: Updated for variants, but still having trouble getting it to use Spack-supplied libjpeg.
2016-04-03 21:42:55 -04:00
py-pmw
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py-pychecker
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py-pycparser
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py-pyelftools
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py-pygments
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py-pylint
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py-pypar
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py-pyparsing
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py-pyqt
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py-pyside
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py-pytables
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py-python-daemon
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py-pytz
Added version 2016.3.
2016-03-30 11:10:32 -05:00
py-pyyaml
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py-rpy2
…
py-scientificpython
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py-scikit-image
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
py-scikit-learn
Add missing dependencies.
2016-04-04 19:01:44 -05:00
py-scipy
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py-setuptools
Merge branch 'osx-fixes' of git://github.com/mathstuf/spack into mathstuf-osx-fixes
2016-04-14 15:25:24 +02:00
py-shiboken
…
py-sip
…
py-six
Added version 1.10.0.
2016-03-30 11:08:28 -05:00
py-sphinx
…
py-SQLAlchemy
Reformat the description.
2016-04-24 18:06:51 -05:00
py-sympy
Added version 1.0 of sympy. Beginning with this version, sympy requires
2016-04-02 15:50:20 -05:00
py-tappy
…
py-tuiview
…
py-twisted
…
py-urwid
…
py-virtualenv
Added version 15.0.1
2016-03-30 11:06:04 -05:00
py-wheel
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py-xlrd
Reformat the description.
2016-04-24 18:06:51 -05:00
py-yapf
…
python
Put f2py of py-numpy in python ignore list. (#827)
2016-04-26 10:32:14 -07:00
qhull
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qrupdate
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qt
Un-fix version 3
2016-05-02 11:28:20 -05:00
qthreads
Add some qthreads patches
2016-04-19 16:45:05 -04:00
R
This commit explicitly sets libdir. This is necessary because different
2016-04-23 12:30:34 -05:00
r-abind
Reformat description text.
2016-04-24 18:11:18 -05:00
r-BiocGenerics
Reformat description text.
2016-04-24 18:11:18 -05:00
r-filehash
Reformat description text.
2016-04-24 18:11:18 -05:00
r-magic
Reformat description text.
2016-04-24 18:11:18 -05:00
raja
Added a package for the RAJA system
2016-05-02 14:32:57 -07:00
ravel
…
readline
Add bash package
2016-04-06 15:57:03 -05:00
rose
…
rsync
…
ruby
…
SAMRAI
…
samtools
…
scalasca
…
scons
Subversion uses serf for http repos
2016-05-04 16:16:36 +00:00
scorep
…
scotch
Integrated improvements from PR #893 to remove hardcoded MPI path.
2016-05-09 14:39:42 -07:00
scr
…
serf
Subversion uses serf for http repos
2016-05-04 16:16:36 +00:00
silo
Build static and shared libraries for silo
2016-05-04 22:50:15 -04:00
slepc
…
snappy
…
sparsehash
…
spindle
…
spot
…
sqlite
…
stat
…
subversion
Subversion uses serf for http repos
2016-05-04 16:16:36 +00:00
suite-sparse
suite-sparse: temporary disable TBB due to linking errors
2016-04-04 09:05:27 +02:00
sundials
…
superlu-dist
Mark SuperLU_DIST version 4.3 as the preferred version since petsc and trilinos are not tested with 5.0.
2016-05-03 12:05:35 -06:00
swig
Updated the Swig package file to include versions for all of the popular Swig releases. (#790)
2016-04-23 12:15:14 -07:00
szip
…
tar
…
task
…
taskd
…
tau
…
tbb
…
tcl
Fixed tk, and used uverridden url_for_version().
2016-04-01 16:38:02 -04:00
tetgen
…
texinfo
…
the_silver_searcher
the_silver_searcher: add missing dependency
2016-04-29 09:52:49 +02:00
thrift
…
tk
Fixed tk, and used uverridden url_for_version().
2016-04-01 16:38:02 -04:00
tmux
…
tmuxinator
…
triangle
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trilinos
metis 4.0.3
2016-04-06 15:49:59 -07:00
turbomole
Add the turbomole package. (#826)
2016-04-26 10:31:48 -07:00
udunits2
…
uncrustify
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unibilium
pile of dependencies for neovim, including luajit and libuv
2016-05-06 15:33:26 -07:00
util-linux
…
valgrind
…
vim
…
visit
Correctly extend std_cmake_args
2016-05-04 22:49:47 -04:00
vtk
Add variant opengl2, which is ON by default
2016-03-31 10:39:34 -04:00
wget
Refine wget's OpenSSL configuration options (#786)
2016-04-23 12:15:32 -07:00
wx
…
wxpropgrid
…
xcb-proto
…
xerces-c
Remove tutorial comments
2016-05-05 14:01:21 -05:00
xz
…
yasm
…
zeromq
…
zfp
…
zlib
…
zoltan
Update Package : Zoltan (#833)
2016-04-26 10:24:36 -07:00
zsh
…