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Jon Rood d7b826a0aa nalu package: update dependency (#7245) 
Yaml-cpp hasn't tagged a release in over 2 years, yet they have fixed
many things and now have the ability to use find_package in CMake.
Since we use this feature in Nalu, we require the latest yaml-cpp
until they tag a new release. I have also deprecated the now
unnecessary ENABLE_INSTALL flag.
2018-02-22 14:14:39 -08:00
..
abinit Add Abinit 8.6.3 (#6959) 2018-01-20 10:20:00 -06:00
abyss abyss: added missing libtool dependency (#7054) 2018-01-31 14:01:49 +01:00
ack Version update for 2.22 (#7023) 2018-01-22 07:12:00 +01:00
activeharmony
adept-utils
adios Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
adios2 ADIOS 2.1.0 (#7240) 2018-02-14 13:54:13 -08:00
adlbx
adol-c
albert
alglib
allinea-forge
allinea-reports
allpaths-lg
alquimia Xsdk 0.3.0 (#6277) 2017-11-27 22:08:08 -08:00
alsa-lib
amg
amg2013
amp Adding new package amp (#6471) 2017-11-27 14:43:03 -07:00
ampliconnoise
amrex
andi
angsd angsd: new version, and conflict for newer htslib with old version (#7122) 2018-02-05 18:33:12 +01:00
ant
antlr
ape
apex
applewmproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
appres Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
apr
apr-util
archer
argp-standalone argp-standalone@1.3: new package (#7014) 2018-01-23 22:49:17 +01:00
argtable
arlecore
armadillo
arpack-ng Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
ascent updates to conduit and ascent packages (#7040) 2018-02-12 10:20:46 -08:00
asciidoc
aspa
aspell
aspell6-de
aspell6-en
aspell6-es
assimp
astra
astral
astyle changed url for astyle (#6863) 2018-01-09 09:40:27 -06:00
atk Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
atlas Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
atom-dft atom-dft: new package plus dependencies (#6653) 2018-01-02 20:32:37 -06:00
atompaw
atop
augustus Augustus update hash (#7286) 2018-02-19 22:06:40 -08:00
autoconf Do not construct path to perl command manually (#6927) 2018-01-13 22:10:42 -06:00
autodock-vina
autogen Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
automaded
automake
bamtools bamtools: Add version 2.5.1 (#6770) 2018-01-02 10:55:07 -08:00
bamutil
barrnap barrnap: Create new package (#6855) 2018-01-08 19:35:31 -06:00
bash Updated misc devel tools. (#6897) 2018-01-11 10:06:53 -06:00
bash-completion Fix installation of bash-completion (#6911) 2018-01-14 15:40:22 -06:00
bats
bazel bazel: include SPACK_DEBUG_LOG_ID in environment (#6562) 2017-12-11 10:34:06 -08:00
bbcp
bbmap
bcftools bcftools is a AutotoolsPackage. (#6881) 2018-01-10 09:45:05 -06:00
bcl2fastq2
bdftopcf Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
bdw-gc
bear
beast2
bedtools2 bedtools2: Add version 2.27.1 (#6693) 2017-12-16 19:36:35 -07:00
beforelight Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
benchmark
berkeley-db
bertini
bib2xhtml
bigreqsproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
binutils libtool, binutils: fix darwin linking (#7073) 2018-01-28 15:36:24 +01:00
bioawk
biopieces new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
bison
bitmap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
blast-plus
blat
blaze
bliss
blitz Blitz 1.0.1 (#6765) 2018-01-06 12:02:41 -06:00
bmake bmake@20171207: new package (#7099) 2018-01-31 13:42:41 +01:00
bml bml: enable MPI by default (#7324) 2018-02-22 09:04:49 -07:00
bohrium add OctavePackage (#6746) 2018-01-02 20:03:27 -06:00
boost Add boost 1.66.0 (#7000) 2018-01-20 17:10:25 +01:00
boostmplcartesianproduct
bowtie
bowtie2
boxlib
bpp-core
bpp-phyl
bpp-seq
bpp-suite
braker
branson
breakdancer added breakdancer (#6319) 2017-12-14 14:43:32 -07:00
breseq breseq: Create new package (#6648) 2017-12-16 19:47:11 -07:00
brigand
bsseeker2
bucky
busco
butter
bwa bwa: added version 0.7.16a and checksum (#6658) 2017-12-16 19:43:02 -07:00
byobu
bzip2 Bzip2 now uses 'spack_cc' as a compiler, instead of plain 'cc' (#7074) 2018-01-26 09:52:04 +01:00
c-blosc c-blosc: 1.12.1 (#6571) 2017-12-05 12:49:22 +01:00
caffe
cairo Updated i3 dependencies. (#6885) 2018-01-10 11:02:07 -06:00
caliper Caliper update, add version 1.6.0 (#6680) 2017-12-16 19:39:52 -07:00
callpath Add version 1.04 (#6259) 2017-11-10 15:52:48 -08:00
candle-benchmarks ECP-CANDLE benchmark script (#7271) 2018-02-22 09:54:46 -08:00
cantera
canu Do not construct path to perl command manually (#6927) 2018-01-13 22:10:42 -06:00
cap3
cares
cask
casper casper: new package (#6873) 2018-01-09 22:07:05 -06:00
catalyst Catalyst package (#6834) 2018-01-13 22:20:39 -06:00
catch Updated catch to newer version (up to 2.1.0) (#6933) 2018-01-14 15:39:10 -06:00
cbench cbench set its environment using setup_environment (#7236) 2018-02-21 06:42:51 +01:00
cblas
cbtf
cbtf-argonavis
cbtf-argonavis-gui
cbtf-krell
cbtf-lanl
ccache
cctools
cdbfasta
cdd
cddlib
cdhit
cdo Package 'cdo': new versions. (#7250) 2018-02-16 13:39:56 +01:00
cereal
cfitsio Version update for cfitsio (#7032) 2018-01-23 09:44:40 +01:00
cgal Fix CGAL checksum and switch to more stable URL (#6511) 2017-11-30 09:18:54 +01:00
cgm
cgns Update CGNS and add CGNS capability to Trilinos (#6568) 2017-12-05 14:33:36 -07:00
charm
check
chlorop
chombo
cityhash
clamr clamr: needs cmake-3.1 (#7297) 2018-02-21 09:11:50 -08:00
cleaveland4
cleverleaf
clfft
clhep Fix GEANT4 and make more portable and flexible (#6956) 2018-01-23 10:13:08 +01:00
clingo clingo@5.2.2: new package (#7091) 2018-02-03 10:05:06 +01:00
cloc
cloog
cloverleaf
cloverleaf3d
clustalo
clustalw
cmake Updated misc devel tools. (#6897) 2018-01-11 10:06:53 -06:00
cmocka
cmor
cnmem
cnpy LBANN OS X (#7105) 2018-01-31 09:38:53 -08:00
cntk
cntk1bitsgd
codar-cheetah
coevp
cohmm cohmm: use more sane defaults (#7296) 2018-02-21 15:03:53 -07:00
coinhsl coinhsl: add version 2014.01.10 (#6909) 2018-01-12 17:27:52 -06:00
comd comd: more sane default (#7046) 2018-02-08 12:36:23 -05:00
compiz
compositeproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
conduit updates to conduit and ascent packages (#7040) 2018-02-12 10:20:46 -08:00
constype Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
converge
coreutils
corset
cosmomc
cosp2
cp2k cp2k: add dependency on smm and libxc & new version 5.1 (#6194) 2017-11-15 16:49:08 -07:00
cppad
cppcheck Add version 1.81 of cppcheck (#6912) 2018-01-14 08:14:55 -06:00
cpprestsdk
cppunit
cppzmq
cram
cryptopp
cscope Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
csdp
ctffind Add a package: ctffind. (#6836) 2018-01-05 13:46:48 -06:00
cub
cube
cuda CUDA: 9.1 (#6663) 2017-12-13 14:43:40 +01:00
cuda-memtest Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
cudnn
cufflinks
cups
curl make nghttp2 optional for curl, as it does not build for older compilers. (#5977) 2018-01-04 09:45:45 -06:00
cvs
czmq Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
dakota
daligner
damageproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
damselfly
darshan-runtime
darshan-util
dash
datamash
dataspaces
dbus
dealii dealii: update CMake dependency (#7010) 2018-01-20 21:59:24 +01:00
dejagnu
delly2
denovogear DeNovoGear: Create new package (#6699) 2017-12-16 19:34:53 -07:00
dia Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
dialign-tx dialign-tx adding patch for gcc@5.4.0 (#6413) 2017-11-26 16:14:18 -07:00
diamond new package: DIAMOND (#6793) 2018-01-02 12:03:45 -08:00
diffsplice new package: diffsplice (#7187) 2018-02-09 20:15:58 -08:00
direnv
discovar
discovardenovo discovardenovo: adding new package (#6888) 2018-01-10 20:40:41 -06:00
dlpack
dmlc-core
dmxproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
docbook-xml
docbook-xsl
dos2unix
double-conversion
doxygen
dri2proto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
dri3proto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
dtcmp
dyninst
ea-utils
easybuild
ebms
eccodes Update for 'eccodes'. (#6604) 2017-12-08 09:34:37 +01:00
ecp-proxy-apps
editres Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
eigen
elemental Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
elfutils elfutils: add --no-as-needed flag for library ordering issue (#6256) 2017-11-10 11:42:37 -08:00
elk
elpa Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
emacs Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
emboss
encodings Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
environment-modules
es
esmf Esmf fixes for Cray, OSX and mpich (#6768) 2018-01-02 19:43:55 -06:00
espresso yambo: added new package (#7301) 2018-02-22 12:11:51 +01:00
essl new package: essl (#6335) 2018-01-26 10:38:37 -08:00
ethminer A new package: ethminer. (#6908) 2018-01-12 07:50:07 -06:00
etsf-io
everytrace
everytrace-example
evieext Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
exabayes
exampm
exasp2
exmcutils
exodusii
exonerate Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
expat
expect
express express: new package (#6281) 2017-11-23 08:04:02 -07:00
extrae
exuberant-ctags
f90cache
falcon
farmhash
fastjar
fastmath
fastme fastme: new package (#6219) 2017-11-08 21:56:32 -07:00
fastphase
fastq-screen
fastqc
fastqvalidator
fasttree Feature/fasttree (#6227) 2017-12-20 19:10:24 -08:00
fastx-toolkit
fenics
ferret
ffmpeg
fftw fftw package: improved libs implementation (#7212) 2018-02-13 18:26:15 -08:00
fimpute
findutils
fio
fish Update fish url for fish 2.7.1 (#7089) 2018-02-04 09:05:44 +01:00
fixesproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
flac
flang clang,flang: update CC, CXX environment in installation module (#6737) 2017-12-22 07:32:10 +01:00
flann
flash
flecsale
flecsi flecsi: fix build (#6168) 2017-11-08 14:03:05 -07:00
flex flex: restrict GCC conflict to newer Ubuntu releases (#6963) 2018-01-20 21:36:45 +01:00
flint
flit Flit package (#6260) 2017-11-30 09:05:40 +01:00
fltk fltk depends on libx11. (#6816) 2018-01-03 10:14:51 -06:00
flux Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
fluxbox fluxbox lightweight window manager (#7169) 2018-02-12 19:35:18 +01:00
fmt
foam-extend ENH: improved openfoam module creation (issue #4942) 2017-12-20 11:32:33 -08:00
folly Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-adobe-75dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-adobe-100dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-adobe-utopia-75dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-adobe-utopia-100dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-adobe-utopia-type1 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-alias Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-arabic-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-75dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-100dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-lucidatypewriter-75dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-lucidatypewriter-100dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-ttf Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bh-type1 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bitstream-75dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bitstream-100dpi Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bitstream-speedo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-bitstream-type1 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-cronyx-cyrillic Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-cursor-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-daewoo-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-dec-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-ibm-type1 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-isas-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-jis-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-micro-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-misc-cyrillic Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-misc-ethiopic Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-misc-meltho Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-misc-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-mutt-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-schumacher-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-screen-cyrillic Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-sony-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-sun-misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-util Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-winitzki-cyrillic Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
font-xfree86-type1 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fontcacheproto
fontconfig Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fontsproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fonttosfnt Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fpc
fr-hit fr-hit: Create new package (#7132) 2018-01-31 19:28:48 +01:00
freebayes
freetype Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fseq
fsl
fslsfonts Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
fstobdf Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
funhpc
gapbs New Package: GAP Benchmark Suite (#6452) 2017-11-27 06:50:49 -07:00
gapcloser
gapfiller
gasnet gasnet: add 1.30.0 (#6167) 2017-11-08 19:43:13 -07:00
gatk gatk: boilerplate cleanup (#6744) 2018-01-02 20:05:04 -06:00
gaussian
gawk
gblocks
gcc gcc: add version 7.3.0 (#7097) 2018-01-31 13:41:12 +01:00
gccmakedep Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
gccxml add patch for gccxml with gcc@5: (#6913) 2018-01-13 08:46:00 -06:00
gconf
gdal macOS Fix for GDAL (#7155) 2018-02-03 10:06:35 +01:00
gdb Updated misc devel tools. (#6897) 2018-01-11 10:06:53 -06:00
gdbm gdbm: fix lmod global name 'spack_cc' undefined (#7225) 2018-02-14 08:41:50 +01:00
gdk-pixbuf Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
geant4 Fix GEANT4 and make more portable and flexible (#6956) 2018-01-23 10:13:08 +01:00
gearshifft Cleanup: Remove Dbl Brackets (#6848) 2018-01-08 19:42:51 +01:00
gemmlowp
genemark-et
genometools
geos
gettext
gflags
ghostscript Fix missing dependency in ghostscript (#6866) 2018-01-09 08:43:53 -06:00
ghostscript-fonts
giflib
git Fix tests for git package (#6869) 2018-01-10 13:47:38 +01:00
git-imerge git-imerge@1.1.0: new package (#7203) 2018-02-09 19:48:11 +01:00
git-lfs
gl2ps
glew
glfmultiples new package: Glfmultiples (#7055) 2018-02-12 19:35:57 -08:00
glib glib: Fix python handling (#6910) 2018-01-13 08:50:06 -06:00
glimmer glimmer: Create new package (#7208) 2018-02-11 22:22:34 +01:00
glm
global
globalarrays
globus-toolkit globus-toolkit: add version and openssl dependency (#6617) 2017-12-18 15:23:56 -08:00
glog fixed glog compilation for < 0.3.5 (#6463) 2017-11-27 06:50:26 -07:00
glpk
glproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
gmake
gmap-gsnap updating package: gmap-gsnap (#7285) 2018-02-19 22:09:05 -08:00
gmime
gmp
gmsh gmsh: add 3.0.6 (#6718) 2017-12-19 08:31:23 +01:00
gnat
gnu-prolog
gnupg Update gnupg to 2.2.3 (#6573) 2017-12-05 14:29:20 -07:00
gnuplot Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
gnutls Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
go
go-bootstrap
gobject-introspection Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
googletest
gotcha gotcha: new package (#6391) 2017-11-21 08:04:43 -07:00
gource Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
gperf
gperftools
grackle grackle package: add float option (#7196) 2018-02-12 14:32:24 -08:00
gradle
grandr
graphlib
graphmap
graphviz Reworked the graphviz package (#6865) 2018-01-15 15:26:14 +01:00
grib-api Update for 'grib-api'. (#6605) 2017-12-08 09:33:30 +01:00
groff
gromacs
gsl
gslib new package: gslib (#6328) 2018-01-23 10:42:06 -08:00
gtkorvo-atl
gtkorvo-cercs-env
gtkorvo-dill
gtkorvo-enet
gtkplus Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
gts
guidance guidance: new package (#6079) 2017-11-08 14:07:13 -07:00
guile Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
h5hut
h5part
h5utils
h5z-zfp hdf5: fixing ~/+ fortran builds; updated to version 0.8.0 (#7260) 2018-02-19 22:13:13 -08:00
hacckernels
hadoop Hadoop: Replace broken url (#6671) 2017-12-16 19:42:03 -07:00
hapcut2
haploview
harfbuzz Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
harminv
hdf
hdf5 Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
hdf5-blosc
help2man
hepmc hepmc: fix hash and urls, add new version 3.0.0 (#6348) 2017-11-17 18:59:52 -07:00
heppdt
highfive highfive: Update to version 1.5 (#7041) 2018-02-03 10:22:03 +01:00
highwayhash
hisat2
hmmer
hoomd-blue Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
hpccg
hpctoolkit
hpctoolkit-externals
hpgmg hpgmg package: add debug option and new version (#7175) 2018-02-09 19:01:49 -08:00
hpl
hpx
hpx5 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
hsakmt
hstr
htop
htslib
httpie
hub
hunspell
hwloc Rename variant static to shared (#6543) 2017-12-03 16:19:32 -07:00
hybpiper
hydra
hypre hypre: add libs method (#7234) 2018-02-14 09:21:13 +01:00
i3 Updated i3 dependencies. (#6885) 2018-01-10 11:02:07 -06:00
ibmisc
iceauth Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
icedtea Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
icet
ico Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
icu4c icu4c: Update to 60.1 (#6295) 2017-11-14 09:21:35 -07:00
id3lib
idba
igraph
igv IGV: new package (#6710) 2017-12-18 19:37:09 -08:00
igvtools new package: igvtools (#6974) 2018-02-15 16:27:46 -08:00
ilmbase
image-magick
imake Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
impute2
infernal
inputproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
intel added intel 18.0.1 compilers (#6381) 2017-11-25 11:49:02 -07:00
intel-daal intel: add 2018.1 (#6322) 2017-11-15 13:13:15 -07:00
intel-gpu-tools Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
intel-ipp intel: add 2018.1 (#6322) 2017-11-15 13:13:15 -07:00
intel-mkl mkl: fix order of libs (#7280) 2018-02-21 19:14:34 +01:00
intel-mkl-dnn Intel mkl dnn (#6268) 2018-01-02 21:27:34 -06:00
intel-mpi Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
intel-parallel-studio mkl: fix order of libs (#7280) 2018-02-21 19:14:34 +01:00
intel-tbb intel-tbb: add 2018.2 (#6725) 2017-12-19 15:39:42 +01:00
intltool
ior
iozone
ipopt ipopt: fix lmod global name 'prefix' undefined bug (#7224) 2018-02-14 08:40:47 +01:00
isaac Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
isaac-server Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
isl
itstool
itsx
jags jags: lapack fix (#6764) 2018-01-02 19:57:54 -06:00
jansson Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
jasper
jbigkit A new package: jbigkit. (#6847) 2018-01-09 10:03:31 -06:00
jdk
jellyfish casper: new package (#6873) 2018-01-09 22:07:05 -06:00
jemalloc
jmol
jq
json-c Added missing build dependency to json-c (#6211) 2017-11-08 21:55:28 -07:00
json-cwx
json-glib Add UFO and dependencies (#6337) 2017-11-16 09:37:17 -08:00
jsoncpp
judy
julia Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
kahip
kaks-calculator
kaldi Install all the cli tools from all the sub-directories (#6705) 2018-01-02 20:14:39 -06:00
kallisto
kbproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
kdiff3
kealib
kentutils
kmergenie
kokkos
kraken
krims
kripke
kvasir-mpl Add Kvasir MPL (#6529) 2017-12-02 16:02:43 -07:00
laghos laghos: inject CXX (#6664) 2017-12-12 17:26:02 -07:00
lammps
last
latte
launchmon
lazyten
lbann LBANN OS X (#7105) 2018-01-31 09:38:53 -08:00
lbxproxy Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
lcals
lcms
ldc
ldc-bootstrap
legion gasnet: add 1.30.0 (#6167) 2017-11-08 19:43:13 -07:00
leveldb
lftp lftp: adding version 4.6.4 (#6721) 2017-12-19 08:19:33 +01:00
libaec
libaio Fix in download url for package libaio (#6616) 2017-12-08 10:20:14 -07:00
libapplewm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libarchive libarchive@3.3.2: new version (#7113) 2018-01-31 13:39:58 +01:00
libassuan Update gnupg to 2.2.3 (#6573) 2017-12-05 14:29:20 -07:00
libatomic-ops
libbeagle Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libbsd
libbson libbson, libmongoc: Update to 1.9.1 (#6900) 2018-01-11 10:19:44 -06:00
libcanberra Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libcap
libcerf
libcheck Fixed Theano GPU support (#7325) 2018-02-22 09:45:37 -08:00
libcint New Package: Add libcint to spack (#6456) 2017-11-25 21:01:30 -07:00
libcircle
libconfig
libcroco A new package: libcroco. (#7154) 2018-02-03 10:07:02 +01:00
libctl
libdivsufsort
libdmx Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libdrm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libdwarf libdwarf: fix linking, fix build on Darwin (#7124) 2018-01-31 16:12:25 -08:00
libedit
libelf
libemos Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libepoxy
libev Added i3 and its dependencies. (#6805) 2018-01-04 14:45:25 -06:00
libevent
libevpath
libfabric Added v1.4.2 to libfabric package (#7053) 2018-01-31 14:02:21 +01:00
libffi
libffs Package/sosflow (#6122) 2017-11-08 22:07:37 -07:00
libfontenc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libfs Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libgcrypt Update gnupg to 2.2.3 (#6573) 2017-12-05 14:29:20 -07:00
libgd Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libgit2 Added libgit2@0.26.0 (#6952) 2018-01-20 21:57:41 +01:00
libgpg-error
libgpuarray Fixed Theano GPU support (#7325) 2018-02-22 09:45:37 -08:00
libgridxc atom-dft: new package plus dependencies (#6653) 2018-01-02 20:32:37 -06:00
libgtextutils
libharu package libharu: Add build deps (#6883) 2018-01-10 12:28:32 -06:00
libhio Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libice Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libiconv Older versions of libiconv don't work with newer versions of GCC (#6829) 2018-01-10 09:47:33 -06:00
libint
libjpeg
libjpeg-turbo
libksba
liblbxutil Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libmatheval
libmesh
libmng
libmongoc libbson, libmongoc: Update to 1.9.1 (#6900) 2018-01-11 10:19:44 -06:00
libmonitor
libnbc
libogg
liboldx Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libpcap
libpciaccess Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libpfm4
libpipeline Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libpng libpng: CPPFLAGS for -I (#6563) 2017-12-04 15:29:35 -07:00
libpsl Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libpthread-stubs
libquo
libsigsegv
libsm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libsodium libsodium: Update to 1.0.15 (#6643) 2017-12-11 17:27:09 -07:00
libspatialindex
libsplash libSplash: 1.7.0 (#7199) 2018-02-09 12:27:13 +01:00
libssh2 Added added libssh2@1.8.0 (#6951) 2018-01-20 21:56:55 +01:00
libsvm
libszip Package 'libszip': update checksum and list_depth. (#6587) 2017-12-06 18:28:11 -07:00
libtermkey
libtiff Add libtiff@3. (#6818) 2018-01-03 10:02:45 -06:00
libtool libtool: symlink correctly on darwin (#7179) 2018-02-14 13:52:44 -08:00
libunistring
libunwind
libuuid
libuv
libvorbis Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libvterm
libwebsockets Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
libwindowswm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libx11 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxau Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxaw Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxaw3d Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxc Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
libxcb Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxcomposite Fix GEANT4 and make more portable and flexible (#6956) 2018-01-23 10:13:08 +01:00
libxcursor Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxdamage Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxdmcp Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxevie Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxext Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxfixes Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxfont Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxfont2 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxfontcache Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxft Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxi
libxinerama Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxkbcommon Added i3 and its dependencies. (#6805) 2018-01-04 14:45:25 -06:00
libxkbfile Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxkbui Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxml2 Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxmu Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxp Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxpm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxpresent Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxprintapputil Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxprintutil Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxrandr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxrender Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxres Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxscrnsaver Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxshmfence Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxslt
libxsmm LIBXSMM 1.8.3 (#7183) 2018-02-06 14:31:18 +01:00
libxstream
libxt Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxtrap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxtst Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxv Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxvmc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxxf86dga Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxxf86misc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libxxf86vm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
libyogrt
libzip
likwid Do not construct path to perl command manually (#6927) 2018-01-13 22:10:42 -06:00
linkphase3
linux-headers
listres Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
llvm llvm: add version 5.0.1 (#6957) 2018-01-20 21:09:31 +01:00
llvm-lld
llvm-openmp-ompt
lmdb
lmod Relax restriction on lua version. (#5886) 2017-12-08 20:52:00 +01:00
lndir Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
log4cplus A new package: log4cplus. (#7015) 2018-01-23 09:47:34 +01:00
log4cxx
lrslib
lrzip
lua
lua-bitlib
lua-jit
lua-lpeg
lua-luafilesystem
lua-luaposix
lua-mpack
luit Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
lulesh
lumpy-sv A new package: lumpy-sv. (#7009) 2018-01-20 18:38:31 +01:00
lwgrp
lwm2
lz4 lz4 platform=darwin: fix dylib name (#7112) 2018-01-31 16:12:44 -08:00
lzma
lzo
m4
macsio
mad-numdiff
mafft
magics Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
magma magma: cuda updates [from xsdk-0.3.0 branch] (#6160) 2017-11-09 11:34:40 -08:00
makedepend Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
mallocmc Add Maintainer (#6575) 2017-12-05 14:27:56 -07:00
man-db
maq maq: Create new package. (#7133) 2018-01-31 13:12:43 +01:00
mariadb
masa
masurca masurca: new package (#6386) 2017-11-20 21:51:35 -07:00
matio
matlab
maven
maverick
mawk
mbedtls
mcl
mdtest
meep
mefit mefit: Create new package. (#6700) 2017-12-16 19:34:30 -07:00
memaxes
meme meme: add version 4.12.0 (#6388) 2017-11-20 21:50:46 -07:00
meraculous meraculous: new package (#6292) 2017-11-16 09:40:46 -07:00
mercurial fix post install method for py3 in mercurial (#6497) 2017-12-17 12:00:58 -06:00
mesa Update gl/qt options for vtk package (#6551) 2018-01-22 10:46:44 -08:00
mesa-glu
meshkit
meson
mesquite
metaphysicl
metasv MetaSV: adding new package (#6691) 2017-12-16 19:36:11 -07:00
metis Fix for building METIS 4.0.3 with '~shared'. (#7202) 2018-02-13 02:22:25 -08:00
mfem mfem: have hypre link line also link lapack+blas (#7165) 2018-02-15 14:59:07 +01:00
microbiomeutil
minced MinCED: Create new package (#6815) 2018-01-02 19:25:08 -06:00
miniaero
miniamr
miniconda2 Update miniconda to 4.3.30. (#6233) 2017-11-14 12:11:53 -08:00
miniconda3 Update miniconda to 4.3.30. (#6233) 2017-11-14 12:11:53 -08:00
minife
minighost
minigmg
minimap2
minimd
miniqmc miniqmc: initial commit (#6991) 2018-01-19 09:38:21 -07:00
minisign Add new package minisign (#6644) 2017-12-11 17:27:40 -07:00
minismac2d
minitri
minixyce
mira mira: new package (#6385) 2017-11-21 08:04:08 -07:00
mirdeep
mitofates
mitos
mkfontdir Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
mkfontscale Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
mlhka
moab
molcas
mono
mosh
mothur
motif Fix GEANT4 and make more portable and flexible (#6956) 2018-01-23 10:13:08 +01:00
motioncor2 Create a symbolic link to the MotionCor2_x.x.x executable. (#6826) 2018-01-04 21:27:59 -06:00
mozjs Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
mpc
mpe2
mpest
mpfr
mpibash mpibash: move to autotools (#6253) 2017-11-13 10:48:31 -07:00
mpiblast
mpich filter_compiler_path: added the possibility to narrow search path 2018-02-13 02:18:28 -08:00
mpifileutils
mpileaks
mpip
mpir
mpix-launch-swift
mrbayes mrbayes: url now points to github + removed the deprecated sourceforge url (#6578) 2017-12-06 07:58:08 +01:00
mrnet
mrtrix3
msgpack-c Minor package fixes (#6334) 2017-11-16 09:28:40 -07:00
mshadow
multitail
multiverso
mummer
mumps
munge
muparser
muscle
muse
muster
mvapich2 filter_compiler_path: added the possibility to narrow search path 2018-02-13 02:18:28 -08:00
mxml
mxnet
nag
nalu nalu package: update dependency (#7245) 2018-02-22 14:14:39 -08:00
namd
nano
nanoflann
nasm
nauty Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
ncbi-rmblastn
nccl
nccmp
ncdu
ncftp
ncl ncl: Check for ncl binary after installation (#6298) 2017-11-14 09:22:04 -07:00
nco
ncurses Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
ncview
ndiff
nek5000 Update Nek5000 package to Version 17 (#7178) 2018-02-03 17:05:14 -06:00
nekbone Adding Nek5000 to Spack (#6153) 2018-01-04 09:41:53 -06:00
nekcem Add NekCEM package to spack (#6509) 2017-12-08 10:30:42 -07:00
neovim Fix reference to self.versions in neovim package (#6639) 2017-12-10 21:43:49 +01:00
netcdf
netcdf-cxx dealii: add scalapack and various cleanups (#6552) 2017-12-04 08:02:05 +01:00
netcdf-cxx4 dealii: add scalapack and various cleanups (#6552) 2017-12-04 08:02:05 +01:00
netcdf-fortran Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
netgauge
netgen
netlib-lapack Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
netlib-scalapack netlib-scalapack: add the libs property (#7265) 2018-02-18 10:19:03 +01:00
netlib-xblas netlib-xblas 1.0.248: new package (#7024) 2018-01-24 08:28:05 +01:00
nettle
neuron Adding NEURON simulator package (#5097) 2018-01-04 09:55:30 -06:00
nextflow nextflow: adding version 0.21.0 (#6722) 2017-12-19 09:07:33 +01:00
nfft
nghttp2
nginx Updated 'nginx' from v1.12.0 to v1.13.8. (#6810) 2018-01-02 19:29:47 -06:00
ngmlr
ninja
ninja-fortran
nlopt Add new package nlopt (#6499) 2017-11-29 10:27:08 +01:00
nmap
nnvm
node-js add new version to node-js (#6444) 2017-11-25 09:30:06 +01:00
notmuch
npb
npm
npth Update gnupg to 2.2.3 (#6573) 2017-12-05 14:29:20 -07:00
nspr
numactl
numdiff
nut nut: needs cmake-3.0 (#7298) 2018-02-21 09:10:14 -08:00
nwchem
ocaml ocaml@4.06.0: new version (#7078) 2018-01-31 13:49:17 +01:00
oce
oclint oclint: new package (#7076) 2018-02-06 06:35:17 +01:00
oclock Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
octave Octave depends on qt+opengl. (#6437) 2017-11-24 09:40:48 +01:00
octave-optim add OctavePackage (#6746) 2018-01-02 20:03:27 -06:00
octave-splines add OctavePackage (#6746) 2018-01-02 20:03:27 -06:00
octave-struct add OctavePackage (#6746) 2018-01-02 20:03:27 -06:00
octopus
of-adios-write
ompss
ompt-openmp
oniguruma
ont-albacore ont-albacore: add version 2.1.2 (#6278) 2017-11-13 10:47:40 -07:00
opa-psm2 opa-psm2: new package (#6874) 2018-01-10 09:45:34 -06:00
opam opam: new package (#7079) 2018-01-31 13:44:09 +01:00
opari2
openbabel Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
openblas Openblas needs FC, not F77 (#6435) 2017-11-24 07:15:01 +01:00
opencoarrays
opencv Implement opencv libs property (#6457) 2017-11-25 21:00:18 -07:00
openexr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
openfast Updating OpenFAST to use explicit lapack and blas libraries from Spack. (#6824) 2018-01-06 12:01:06 -06:00
openfoam-com package openfoam-com: add version 1712 and update patches (#6820) 2018-01-03 11:30:10 -08:00
openfoam-org Explicitly cast Version to str in openfoam-org (#6880) 2018-01-10 13:48:22 +01:00
openfst
opengl Update gl/qt options for vtk package (#6551) 2018-01-22 10:46:44 -08:00
openjpeg Package 'openjpeg': set INSTALL_NAME_DIR on MacOS for old versions. (#6603) 2017-12-08 13:36:20 +01:00
openmc
openmpi Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
opennurbs Add opennurbs package (#6570) 2017-12-05 10:33:55 -07:00
openscenegraph
openspeedshop Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
openssh Update openSSH to 7.6p1 (#6598) 2017-12-08 10:13:41 -07:00
openssl Revert "openssl: Add perl dependency" (#6831) 2018-01-04 16:46:24 -06:00
opium
opus
orfm
orthomcl
osu-micro-benchmarks Added osu-micro-benchmarks@5.4 (#7149) 2018-01-31 16:10:14 -08:00
otf
otf2
p4est
p7zip
pacbio-daligner
pacbio-damasker
pacbio-dazz-db
pacbio-dextractor
pagit
pagmo
paml
panda
pandaseq PANDAseq: Create new package (#6694) 2017-12-16 19:35:48 -07:00
pango Add url_for_version to pango package (#6939) 2018-01-15 14:05:27 -06:00
papi
paradiseo
parallel
parallel-netcdf Using MPI environment compiler variables for pnetcdf. (#6424) 2017-11-22 21:34:21 -08:00
paraver
paraview Fix build of paraview (#5802) 2018-01-04 09:47:17 -06:00
parmetis Fix type issues with setting flag handlers (#6960) 2018-01-18 17:55:44 -08:00
parmgridgen
parsimonator
parsplice
partitionfinder
patch
patchelf
pathfinder
pax-utils
pbmpi
pcma
pcre Updated i3 dependencies. (#6885) 2018-01-10 11:02:07 -06:00
pcre2
pdsh
pdt
pegtl
pennant
percept new package: Percept (#6636) 2017-12-14 18:11:47 -08:00
perl fix perl dependent modules, #5900 (#5937) 2017-11-08 22:10:50 -07:00
perl-algorithm-diff
perl-app-cmd perl-app-cmd: Create new package (#7019) 2018-01-22 07:09:34 +01:00
perl-array-utils perl-array-utils: Create new package (#7020) 2018-01-22 07:10:17 +01:00
perl-b-hooks-endofscope
perl-bio-perl
perl-bit-vector new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-capture-tiny
perl-carp-clan new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-class-data-inheritable
perl-class-inspector new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-class-load
perl-class-load-xs
perl-cpan-meta-check
perl-data-optlist
perl-data-stag
perl-dbd-mysql new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-dbfile
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-digest-md5 perl-digest-md5: Create new package (#6852) 2018-01-08 19:35:48 -06:00
perl-dist-checkconflicts
perl-encode-locale new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-eval-closure
perl-exception-class
perl-exporter-tiny new package: perl-exporter-tiny (#7030) 2018-02-02 10:28:45 -08:00
perl-extutils-makemaker
perl-extutils-pkgconfig
perl-file-copy-recursive new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-file-listing new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-file-pushd
perl-file-sharedir-install new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-file-slurp-tiny new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-file-which create perl-file-which package (#6800) 2018-01-02 19:36:59 -06:00
perl-font-ttf
perl-gd
perl-gd-graph
perl-gd-text
perl-graph perl-graph: Create new package (#7022) 2018-01-22 07:10:58 +01:00
perl-html-parser new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-html-tagset new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-http-cookies new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-http-daemon new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-http-date new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-http-message new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-http-negotiate new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-inline new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-inline-c new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-intervaltree
perl-io-html new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-io-sessiondata new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-io-socket-ssl new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-io-string
perl-list-moreutils perl-list-moreutils: Create new package (#6997) 2018-01-20 19:09:23 +01:00
perl-log-log4perl meraculous: new package (#6292) 2017-11-16 09:40:46 -07:00
perl-lwp new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-lwp-mediatypes new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-lwp-protocol-https new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-math-cdf
perl-module-build
perl-module-runtime-conflicts
perl-moose
perl-mozilla-ca new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-mro-compat
perl-namespace-clean
perl-net-http new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-net-ssleay new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-params-util
perl-parse-recdescent new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-pdf-api2
perl-pegex new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-perlio-gzip perl-perlio-gzip: Create new package (#7018) 2018-01-22 07:08:41 +01:00
perl-soap-lite new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-star-fusion
perl-statistics-descriptive Perl-statistics-descriptive: Create new package (#6588) 2017-12-08 10:22:16 -07:00
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-uplevel
perl-svg new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-swissknife perl-swissknife: Create new package (#6851) 2018-01-08 18:46:51 -06:00
perl-task-weaken new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-term-readkey
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-most
perl-test-needs
perl-test-requires
perl-test-requiresinternet new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-test-warn
perl-test-warnings
perl-text-csv perl-text-csv: Create new package (#7258) 2018-02-19 22:13:50 -08:00
perl-text-diff
perl-text-unidecode perl-text-unidecode: Create new package (#6854) 2018-01-08 18:45:58 -06:00
perl-time-hires new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-time-piece perl-time-piece: Create new package (#6853) 2018-01-08 18:46:16 -06:00
perl-try-tiny new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-uri new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-uri-escape
perl-version new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-www-robotrules new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-xml-libxml perl-xml-libxml: adding perl module (#6783) 2018-01-02 19:42:09 -06:00
perl-xml-parser
perl-xml-parser-lite new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
perl-xml-simple perl-xml-simple: Create new package (#6849) 2018-01-08 19:36:04 -06:00
perl-yaml-libyaml new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
petsc petsc: use spack-built python for configure (#7176) 2018-02-09 13:11:03 -08:00
pexsi pexsi: add version 0.10.2 (#6232) 2017-11-09 07:21:39 -07:00
pfft
pflotran Xsdk 0.3.0 (#6277) 2017-11-27 22:08:08 -08:00
pfunit new package: Pfunit: unit testing framework for Fortran (#6795) 2018-01-02 12:18:08 -08:00
pgdspider
pgi Update pgi to 17.10 . (#6306) 2017-11-15 13:02:54 -07:00
phantompeakqualtools phantompeakqualtools: new package (#6403) 2017-11-21 15:58:20 -07:00
phasta
phylip
picard picard: Add version 2.17.0 (#6729) 2017-12-20 13:28:37 +01:00
pidx
pigz
pilon new package: pilon (#7033) 2018-02-15 16:23:59 -08:00
piranha
pixman Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
pkg-config Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
pkgconf Updated i3 dependencies. (#6885) 2018-01-10 11:02:07 -06:00
planck-likelihood
plasma plasma: extract plasma changes from xsdk-0.3.0 (#6280) 2017-11-27 11:38:10 -08:00
plink
plumed
pmgr-collective
pmix pmix: add 2.1.0 and more (#7191) 2018-02-14 16:26:49 -08:00
pnfft
pngwriter PNGwriter: 0.7.0 (#7026) 2018-01-31 14:34:52 +01:00
poamsa
pocl pocl: fix link to libtool (#6440) 2017-11-25 11:55:08 -07:00
polymake
porta
portage
postgresql add new version (10.2) (#7272) 2018-02-17 07:27:26 +01:00
ppl
prank
presentproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
preseq
price
primer3
printproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
probconsrna
prodigal prodigal: Create new package (#6870) 2018-01-09 12:57:58 -06:00
proj
protobuf Protobuf fix (#7110) 2018-01-31 09:39:53 -08:00
proxymngr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
pruners-ninja
ps-lite
psi4
pstreams
pugixml
pumi
pvm
py-3to2
py-4suite-xml
py-abipy
py-adios New Package: py-adios (#5686) 2018-01-02 21:37:59 -06:00
py-alabaster
py-apache-libcloud
py-apipkg
py-appdirs
py-appnope
py-apscheduler
py-argcomplete
py-argparse
py-ase
py-asn1crypto
py-astroid Fix astroid dependency and mark broken version (#6493) 2017-11-28 16:43:43 -07:00
py-astropy Fix AstroPy: Missing Markupsafe (#6630) 2017-12-08 10:21:46 -07:00
py-attrs
py-autopep8 Update py-autopep8 to 1.3.3 (#6914) 2018-01-13 22:05:44 -06:00
py-babel
py-backports-abc
py-backports-functools-lru-cache Update py-backports-functools-lru-cache to 1.4 (#6915) 2018-01-14 15:39:53 -06:00
py-backports-shutil-get-terminal-size
py-backports-ssl-match-hostname
py-basemap
py-beautifulsoup4
py-binwalk
py-biom-format
py-biopython package py-biopython: remove py-mx dependency (#6772) 2018-01-02 10:59:21 -08:00
py-bitarray Efficient array of booleans, C extension (#7135) 2018-02-01 18:48:32 +00:00
py-bleach
py-blessings
py-bokeh
py-boltons
py-bottleneck
py-brian
py-brian2 Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
py-bsddb3
py-bx-python py-bx-python: Create new package (#6672) 2017-12-16 19:38:59 -07:00
py-cclib
py-cdat-lite
py-cdo
py-certifi
py-cffi
py-chardet
py-checkm-genome py-checkm-genome: Create new package (#7200) 2018-02-09 19:37:16 +01:00
py-click
py-cogent py-cogent: Create new package (#6624) 2017-12-08 10:38:37 +01:00
py-colorama
py-colormath
py-configparser
py-counter
py-coverage
py-cpuinfo
py-cryptography
py-csvkit
py-current
py-cutadapt
py-cycler
py-cython
py-dask
py-dateutil
py-dbf
py-decorator
py-deeptools
py-dendropy py-dendropy: Create new package (#6528) 2017-12-01 11:00:45 -07:00
py-dev
py-dill
py-dlcpar py-dlcpar (#6229) 2017-11-09 07:21:56 -07:00
py-docutils
py-doxypy py-doxypy conflicts python3 (#6916) 2018-01-13 22:07:14 -06:00
py-doxypypy
py-dryscrape
py-dxchange
py-dxfile
py-easybuild-easyblocks
py-easybuild-easyconfigs
py-easybuild-framework
py-edffile
py-editdistance add package py-editdistance (#6492) 2017-11-28 16:43:00 -07:00
py-elasticsearch
py-elephant Update py-elephant to 0.4.1 (#6917) 2018-01-13 08:44:43 -06:00
py-emcee
py-entrypoints
py-enum34 add conflicts to py-enum34 (#6496) 2017-11-28 16:45:08 -07:00
py-epydoc
py-espresso
py-espressopp
py-et-xmlfile
py-execnet add missing build dependency to py-execnet (#6443) 2017-11-25 11:40:53 -07:00
py-fastaindex
py-fasteners
py-faststructure
py-fiscalyear
py-flake8 Update py-flake8 to 3.5.0 (#6918) 2018-01-13 22:07:46 -06:00
py-flask
py-flexx
py-fparser Py-fparser: python parser for Fortran code (#6794) 2018-01-14 15:42:17 -06:00
py-funcsigs
py-functools32
py-future
py-futures
py-genders
py-genshi
py-git2
py-git-review add version 1.26 to py-git-review and fix run_env (#6919) 2018-01-13 22:08:05 -06:00
py-gnuplot
py-griddataformats
py-guidata
py-guiqwt
py-h5py Py h5py update (#6635) 2017-12-11 17:26:13 -07:00
py-html2text
py-html5lib
py-htseq py-htseq: Create new package. (#6623) 2017-12-08 10:36:57 +01:00
py-httpbin
py-hypothesis
py-idna
py-igraph
py-imagesize
py-iminuit
py-importlib
py-ipaddress
py-ipdb
py-ipykernel
py-ipython
py-ipython-genutils
py-ipywidgets
py-isort add package py-isort (#6491) 2017-11-28 16:42:47 -07:00
py-itsdangerous
py-jdcal
py-jedi
py-jinja2
py-joblib
py-jpype
py-jsonschema
py-junit-xml
py-jupyter-client
py-jupyter-console
py-jupyter-core
py-jupyter-notebook
py-keras
py-latexcodec
py-lazy
py-lazy-object-proxy add package py-lazy-object-proxy (#6489) 2017-11-30 09:17:28 +01:00
py-lazyarray
py-libconf
py-libensemble Add new package py-libensemble (#6525) 2017-12-01 11:01:08 -07:00
py-line-profiler
py-linecache2 add package py-linecache2 (#6448) 2017-11-25 11:42:16 -07:00
py-lit
py-llvmlite add package py-numba (#6323) 2017-11-16 10:13:20 -07:00
py-lmfit
py-localcider py-localcider: Create new package (#7189) 2018-02-06 13:52:37 +01:00
py-lockfile
py-logilab-common
py-lrudict py-lrudict: a LRU-based cache dictionary (#6734) 2018-01-02 20:10:49 -06:00
py-lxml
py-lzstring
py-macholib
py-machotools
py-macs2
py-mako
py-mappy
py-markdown
py-markupsafe
py-matplotlib Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
py-mccabe Add py-mccabe versions up to 0.6.1 (#6920) 2018-01-13 22:08:18 -06:00
py-mdanalysis
py-meep
py-memory-profiler
py-methylcode
py-misopy
py-mistune
py-mock
py-moltemplate moltemplate: add new package (#6702) 2017-12-16 19:33:28 -07:00
py-mongo Fix pymongo package (#6832) 2018-01-05 08:47:36 -06:00
py-monotonic
py-monty
py-mpi4py Cython only needed for develop version of mpi4py (#6780) 2018-01-02 11:34:24 -08:00
py-mpmath
py-multiprocess
py-multiqc py-multiqc: Add version 1.3 (#6554) 2017-12-03 16:21:27 -07:00
py-mx
py-mxnet
py-myhdl
py-mysqldb1
py-nbconvert
py-nbformat
py-neo Update py-neo to 0.5.2 (#6921) 2018-01-13 22:08:38 -06:00
py-nestle
py-netcdf4
py-netifaces
py-networkx
py-nose
py-nosexcover
py-numba add package py-numba (#6323) 2017-11-16 10:13:20 -07:00
py-numexpr
py-numpy py-numpy: add 1.13.3 (#6484) 2017-11-28 13:42:59 +01:00
py-numpydoc
py-olefile
py-ont-fast5-api
py-openpmd-validator openPMD-validator (#7064) 2018-01-31 13:59:38 +01:00
py-openpyxl
py-ordereddict
py-oset
py-packaging
py-palettable
py-pandas py-pandas: add versions 0.19.2 and 0.21.1 (#6687) 2017-12-16 19:38:02 -07:00
py-paramiko
py-pathlib2
py-pathos
py-pathspec
py-patsy
py-pbr Added virtualenvwrapper python package (#7270) 2018-02-22 09:47:05 -08:00
py-periodictable
py-petsc4py py-petsc4py: Update version to 3.8.0 and add dependencies (#5792) 2017-11-15 16:49:36 -07:00
py-pexpect
py-phonopy
py-pickleshare
py-pil
py-pillow
py-pip
py-pipits
py-pkgconfig Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
py-plotly Add: Py-Plotly (#6628) 2017-12-08 10:21:28 -07:00
py-ply
py-pmw
py-pox
py-ppft
py-prettytable
py-proj
py-prompt-toolkit
py-protobuf
py-psutil
py-psyclone py-psyclone: Parallelisation System for climate models (#6797) 2018-01-06 12:02:13 -06:00
py-ptyprocess
py-pudb
py-py
py-py2bit
py-py2cairo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
py-py2neo
py-py4j
py-pyani py-pyani: Create new package (#6811) 2018-01-02 19:27:42 -06:00
py-pyasn1
py-pybedtools py-pybedtools: adding older version 0.6.9 (#7107) 2018-02-14 08:46:10 +01:00
py-pybigwig
py-pybind11 pybind11: 2.2.[1,2] & develop (#7216) 2018-02-11 18:00:22 +01:00
py-pybtex
py-pybtex-docutils
py-pychecker
py-pycodestyle Add py-pycodestyle versions up to 2.3.1 (#6922) 2018-01-13 22:08:51 -06:00
py-pycparser
py-pycrypto
py-pycurl
py-pydatalog
py-pydispatcher
py-pydot
py-pyelftools
py-pyfasta
py-pyfftw
py-pyflakes Add py-pyflakes versions up to 1.6.0 (#6923) 2018-01-13 22:09:17 -06:00
py-pygments
py-pygobject
py-pygpu Fixed Theano GPU support (#7325) 2018-02-22 09:45:37 -08:00
py-pygtk Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
py-pylint remove breaking version and cleanup of dependencies (#6494) 2017-11-28 16:46:23 -07:00
py-pymatgen
py-pyminifier
py-pympler
py-pynn Add PyNN 0.9.1 (#6926) 2018-01-13 22:10:10 -06:00
py-pypar
py-pyparsing
py-pypeflow
py-pyprof2html
py-pyqt
py-pyrad
py-pysam py-pysam: adding old version 0.7.7 (#6675) 2017-12-13 09:01:45 +01:00
py-pyscaf
py-pyserial
py-pyside
py-pysocks
py-pytables
py-pytest
py-pytest-cov
py-pytest-flake8
py-pytest-httpbin
py-pytest-mock
py-pytest-runner add missing build dependency to py-pytest-runner (#6490) 2017-11-28 16:52:18 -07:00
py-pytest-xdist
py-python-daemon
py-python-gitlab
py-pythonqwt Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
py-pytz Add: Py-Plotly (#6628) 2017-12-08 10:21:28 -07:00
py-pyvcf py-pyvcf: versions 0.6.7 and 0.6.8 (#6743) 2018-02-20 17:14:06 -06:00
py-pywavelets
py-pyyaml
py-qtawesome
py-qtconsole Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
py-qtpy
py-quantities
py-quast py-quast: Create new package (#7254) 2018-02-18 14:33:59 +01:00
py-radical-utils
py-ranger
py-readme-renderer
py-regex
py-reportlab py-reportlab: Create new package (#6612) 2017-12-08 10:22:46 +01:00
py-requests Add: Py-Plotly (#6628) 2017-12-08 10:21:28 -07:00
py-restview
py-rope
py-rpy2
py-rsa
py-rseqc new package: py-rseqc (#6773) 2018-01-02 11:10:55 -08:00
py-rtree
py-saga-python
py-scandir py-scandir: a better directory iterator, backport to 2.7 (#6739) 2018-01-02 20:08:58 -06:00
py-scientificpython
py-scikit-image add missing dependency to py-scikit-image (#6446) 2017-11-25 11:39:16 -07:00
py-scikit-learn
py-scipy pi-scipy: add 1.0.0 (#6486) 2017-11-28 13:42:27 +01:00
py-seaborn
py-setuptools
py-setuptools-git py-setuptools-git: Create new package (#7131) 2018-01-31 16:52:34 +01:00
py-setuptools-scm add package py-setuptools-scm (#6449) 2017-11-25 11:38:10 -07:00
py-sfepy sfepy: Create new package (#6439) 2017-11-24 12:21:09 +01:00
py-sh
py-shiboken
py-simplegeneric
py-simplejson
py-singledispatch
py-sip
py-six Add: Py-Plotly (#6628) 2017-12-08 10:21:28 -07:00
py-slepc4py
py-sncosmo
py-snowballstemmer
py-spectra
py-spefile
py-spglib
py-sphinx
py-sphinx-bootstrap-theme
py-sphinx-rtd-theme
py-sphinxcontrib-bibtex
py-sphinxcontrib-programoutput
py-sphinxcontrib-websupport
py-spyder
py-spykeutils
py-sqlalchemy
py-statsmodels
py-stevedore Added virtualenvwrapper python package (#7270) 2018-02-22 09:47:05 -08:00
py-storm
py-subprocess32
py-symengine
py-symfit
py-sympy
py-tabulate
py-tappy
py-terminado
py-tetoolkit py-tetoolkit: Create new package (#6673) 2017-12-16 19:38:36 -07:00
py-theano Fixed Theano GPU support (#7325) 2018-02-22 09:45:37 -08:00
py-tifffile
py-toml Flit package (#6260) 2017-11-30 09:05:40 +01:00
py-tomopy
py-tornado
py-tqdm
py-traceback2 add package py-traceback2 (#6450) 2017-11-25 11:37:38 -07:00
py-traitlets
py-tuiview
py-twisted
py-typing
py-tzlocal
py-umi-tools py-umi-tools: Create new package (#6823) 2018-01-04 08:55:37 -06:00
py-unittest2 add missing dependency to py-unittest2 (#6447) 2017-11-25 11:38:42 -07:00
py-unittest2py3k
py-urllib3
py-urwid
py-vcversioner
py-virtualenv
py-virtualenv-clone Added virtualenvwrapper python package (#7270) 2018-02-22 09:47:05 -08:00
py-virtualenvwrapper Added virtualenvwrapper python package (#7270) 2018-02-22 09:47:05 -08:00
py-vsc-base
py-vsc-install
py-wcsaxes
py-wcwidth
py-webkit-server
py-werkzeug
py-wheel
py-widgetsnbextension
py-wrapt
py-xarray
py-xattr py-xattr: a python interface to access extended file attribute (#6747) 2018-01-02 20:02:03 -06:00
py-xlrd
py-xlsxwriter
py-xmlrunner
py-xopen
py-xpyb
py-xvfbwrapper
py-yapf
py-yt py-yt: Yt-project is moved. Add new version. (#6409) 2017-11-23 07:25:35 +01:00
py-zmq
python Set a default python that is consistent with the libraries in PYTHONHOME (#7157) 2018-02-11 23:08:45 -08:00
qbank
qbox
qhull
qmcpack QMCPACK package: update blas/lapack detection (#6753) 2017-12-22 16:47:49 -08:00
qmd-progress
qrupdate qrupdate: fix blas/lapack and compilation of macOS (#6614) 2017-12-08 10:24:44 +01:00
qt Update gl/qt options for vtk package (#6551) 2018-01-22 10:46:44 -08:00
qt-creator
qtgraph
qthreads
quinoa
qwt
r R package: add version v3.2.5 (#7139) 2018-02-13 12:11:52 -08:00
r-a4
r-a4base
r-a4classif
r-a4core
r-a4preproc
r-a4reporting
r-abadata
r-abaenrichment
r-abind
r-absseq
r-acde
r-acepack
r-acgh
r-acme
r-ada
r-adabag
r-ade4
r-adegenet
r-adsplit
r-affxparser
r-affy
r-affycomp
r-affycompatible
r-affycontam
r-affycoretools
r-affydata
r-affyexpress
r-affyilm
r-affyio
r-affypdnn
r-affyplm
r-affyqcreport
r-affyrnadegradation
r-agdex
r-agilp
r-agimicrorna
r-aims
r-aldex2
r-allelicimbalance r-allelicimbalance: Create new package. (#6044) 2017-11-08 21:52:46 -07:00
r-alpine
r-als
r-alsace
r-altcdfenvs
r-ampliqueso r-ampliqueso: Create new package. (#6132) 2017-11-08 14:05:53 -07:00
r-analysispageserver r-analysispageserver: Create new package. (#6135) 2017-11-09 07:23:10 -07:00
r-anaquin r-anaquin: Create new package. (#6138) 2017-11-08 14:05:17 -07:00
r-aneufinder r-aneufinder: Create new package. (#6191) 2017-11-08 14:03:22 -07:00
r-aneufinderdata r-aneufinderdata: Create new package. (#6192) 2017-11-08 14:03:35 -07:00
r-annaffy
r-annotate
r-annotationdbi
r-annotationfilter
r-annotationforge
r-annotationhub
r-ape
r-assertthat
r-backports
r-bamsignals
r-base64
r-base64enc
r-beanplot
r-bh
r-bindr r-bindr: created new package (#6285) 2017-11-14 09:19:49 -07:00
r-bindrcpp r-bindrcpp: Create new package (#6366) 2017-11-18 06:36:39 -07:00
r-biobase
r-biocgenerics
r-biocinstaller
r-biocparallel
r-biocstyle r-biocstyle: Create new package. (#6503) 2018-01-10 23:13:31 -06:00
r-biomart
r-biomformat r-biomformat: Create new package. (#6517) 2017-11-30 09:14:12 +01:00
r-biostrings
r-biovizbase
r-bit
r-bit64
r-bitops
r-blob
r-bookdown r-bookdown: Create new package. (#6504) 2018-01-10 23:13:12 -06:00
r-boot
r-brew
r-broom r-broom: new package (#6282) 2017-11-21 10:49:09 +01:00
r-bsgenome
r-bumphunter
r-c50
r-callr r-callr: created new package (#6223) 2017-11-08 21:59:21 -07:00
r-car
r-caret
r-category
r-catools
r-cellranger r-cellranger: Create new package. (#6237) 2017-11-09 13:19:25 -07:00
r-checkmate
r-checkpoint
r-chemometrics r-chemometrics: Create new package (#6379) 2017-11-20 11:56:33 -07:00
r-chron
r-circlize
r-class
r-classint r-classint: created new package (#6481) 2017-11-28 09:29:29 +01:00
r-cli r-cli: new package (#6476) 2017-11-28 09:21:12 +01:00
r-clipr r-clipr: created new package (#6249) 2017-11-10 11:11:45 -07:00
r-cluster
r-clusterprofiler r-clusterprofiler: Create new package. (#6356) 2017-11-17 18:57:40 -07:00
r-coda
r-codetools
r-coin
r-colorspace
r-complexheatmap
r-corpcor
r-corrplot
r-covr r-covr: Create new package. (#6239) 2017-11-09 13:19:53 -07:00
r-cowplot
r-crayon
r-crosstalk r-crosstalk: Create new package (#6383) 2017-11-20 21:52:58 -07:00
r-cubature
r-cubist
r-curl
r-data-table
r-dbi Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-dbplyr r-dbplyr: created new package (#6311) 2017-11-15 13:09:11 -07:00
r-delayedarray
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-deseq
r-deseq2
r-desolve
r-devtools
r-diagrammer
r-dichromat
r-diffusionmap r-diffusionmap: Create new package (#6378) 2017-11-20 11:56:47 -07:00
r-digest
r-diptest
r-dnacopy
r-do-db r-do-db: Create new package. (#6353) 2017-11-17 18:58:23 -07:00
r-domc
r-doparallel
r-dorng Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-dose r-dose: Create new package. (#6355) 2017-11-18 12:54:14 -07:00
r-downloader Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-dplyr r-broom: new package (#6282) 2017-11-21 10:49:09 +01:00
r-dt
r-dtw r-dtw: Create new package (#6365) 2017-11-18 06:35:47 -07:00
r-dygraphs
r-e1071
r-edger
r-ellipse
r-ensembldb
r-ergm
r-evaluate
r-expm
r-factoextra
r-factominer
r-ff
r-fftwtools r-fftwtools: new package (#6532) 2017-12-03 16:20:32 -07:00
r-fgsea r-fgsea: Create new package. (#6354) 2017-11-17 18:58:01 -07:00
r-filehash
r-flashclust
r-flexmix
r-fnn r-fnn: Create new package (#6384) 2017-11-20 21:52:39 -07:00
r-forcats r-forcats: created new package (#6291) 2017-11-14 09:21:21 -07:00
r-foreach
r-forecast r-forecast: Create new package. (#6213) 2017-11-08 19:49:58 -07:00
r-foreign
r-formatr
r-formula
r-fpc
r-fracdiff r-fracdiff: Create new package. (#6214) 2017-11-08 19:50:18 -07:00
r-futile-logger Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-futile-options
r-gbm
r-gcrma
r-gdata
r-gdsfmt r-gdsfmt: new package (#7035) 2018-01-23 09:42:10 +01:00
r-geiger
r-genefilter
r-geneplotter
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-geomorph
r-geoquery
r-geosphere
r-getopt r-getopt: new package (#6973) 2018-01-20 19:18:07 +01:00
r-getoptlong Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-ggally
r-ggbio
r-ggdendro
r-ggjoy r-ggjoy: Create new package (#6399) 2017-11-21 13:44:25 -07:00
r-ggmap
r-ggplot2
r-ggpubr
r-ggrepel
r-ggridges r-ggridges: Create new package (#6376) 2017-11-20 14:18:16 -07:00
r-ggsci
r-ggvis Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-gistr
r-git2r
r-glmnet Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-globaloptions
r-glue r-glue: created new package (#6283) 2017-11-13 16:25:52 -07:00
r-gmodels
r-gmp
r-go-db
r-googlevis
r-gosemsim r-gosemsim: Create new package. (#6352) 2017-11-17 18:58:43 -07:00
r-gostats
r-gplots
r-graph
r-gridbase
r-gridextra
r-gseabase
r-gsubfn r-gsubfn: Create new package. (#6209) 2017-11-08 19:51:51 -07:00
r-gtable
r-gtools
r-gtrellis
r-gviz
r-haven r-haven: created new package (#6293) 2017-11-21 09:54:43 +01:00
r-hexbin r-vsn: new package (#6210) 2017-11-08 19:51:35 -07:00
r-highr
r-hmisc
r-hms Adding list_url to r-hms package (#6473) 2017-11-27 14:40:02 -07:00
r-htmltable
r-htmltools Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-htmlwidgets
r-httpuv Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-httr
r-hwriter Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-hypergraph
r-ica r-ica: Create new package (#6400) 2017-11-21 13:43:02 -07:00
r-igraph
r-illuminaio
r-impute
r-influencer
r-inline
r-interactivedisplaybase
r-ipred
r-iranges
r-irdisplay
r-irkernel
r-irlba
r-iso
r-iterators
r-janitor r-janitor: created new package (#6313) 2017-11-15 13:09:24 -07:00
r-jaspar2018 r-jaspar2018: Create new package. (#7221) 2018-02-14 08:35:16 +01:00
r-jpeg
r-jsonlite Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-kegg-db
r-kegggraph r-kegggraph: Create new package. (#6580) 2017-12-06 18:29:22 -07:00
r-keggrest
r-kernlab
r-kernsmooth
r-kknn
r-knitr
r-labeling
r-lambda-r
r-laplacesdemon
r-lars r-lars: Create new package (#6453) 2017-11-25 09:24:53 +01:00
r-lattice Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-latticeextra
r-lava
r-lazyeval
r-leaflet
r-leaps
r-learnbayes
r-limma
r-lme4
r-lmtest
r-locfit Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-log4r r-log4r: Create new package. (#6133) 2017-11-09 10:23:48 -07:00
r-lpsolve
r-lsei
r-lubridate
r-magic
r-magrittr
r-makecdfenv
r-maldiquant
r-mapproj
r-maps
r-maptools
r-markdown
r-mass
r-matrix r-rcppblaze: new package (#7209) 2018-02-13 14:07:18 +01:00
r-matrixmodels
r-matrixstats Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-mclust
r-mcmcglmm
r-mda
r-memoise Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-mergemaid
r-methodss3
r-mgcv r-powerlaw: new package (#7222) 2018-02-14 08:36:34 +01:00
r-mime
r-minfi
r-minqa
r-mixtools r-mixtools: Create new package (#6421) 2017-11-23 09:01:10 +01:00
r-mlbench
r-mlinterfaces
r-mnormt r-mnormt: created new package (#6287) 2017-11-14 09:20:06 -07:00
r-modelmetrics
r-modelr r-modelr: created new package (#6289) 2017-11-21 09:26:44 +01:00
r-modeltools
r-mpm Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-msnbase r-msnbase: new package (#6207) 2017-11-08 19:52:38 -07:00
r-multcomp
r-multtest
r-munsell
r-mvtnorm
r-mzid
r-mzr r-mzr: created new package (#6206) 2017-11-08 19:53:00 -07:00
r-nanotime r-nanotime: new package (#6519) 2017-11-30 09:12:58 +01:00
r-ncbit
r-ncdf4
r-network
r-networkd3
r-nlme
r-nloptr
r-nmf
r-nnet
r-nnls
r-nor1mix Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-np
r-numderiv
r-oligoclasses
r-oo
r-openssl
r-org-hs-eg-db r-org-hs-eg-db: Create new package. (#6581) 2017-12-06 18:29:04 -07:00
r-organismdbi
r-packrat
r-pacman
r-pamr
r-party
r-partykit
r-pathview r-pathview: Create new package. (#6582) 2017-12-06 18:29:45 -07:00
r-pbapply r-pbapply: Create new package (#6377) 2017-11-21 13:45:12 -07:00
r-pbdzmq
r-pbkrtest
r-pcamethods
r-pcapp r-pcapp: Create new package (#6468) 2017-11-27 13:54:36 -07:00
r-permute
r-pfam-db
r-phantompeakqualtools phantompeakqualtools: new package (#6403) 2017-11-21 15:58:20 -07:00
r-phyloseq r-phyloseq: Create new package. (#6518) 2017-11-30 09:13:31 +01:00
r-pkgconfig Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-pkgmaker
r-plogr
r-plotly r-plotly: Create new package (#6423) 2017-11-23 07:17:17 -07:00
r-plotrix
r-pls
r-plyr
r-pmcmr
r-png
r-powerlaw r-powerlaw: new package (#7222) 2018-02-14 08:36:34 +01:00
r-prabclus
r-praise
r-preprocesscore
r-prettyunits
r-prodlim
r-progress
r-protgenerics
r-proto
r-proxy
r-pryr
r-psych r-psych: created new package (#6286) 2017-11-21 09:40:10 +01:00
r-ptw
r-purrr r-purrr: Create new package. (#6241) 2017-11-09 14:51:30 -07:00
r-quadprog
r-quantmod r-quantmod: Update version to 0.4-11 (#6212) 2017-11-08 19:51:13 -07:00
r-quantreg
r-quantro
r-qvalue r-qvalue: Create new package. (#6137) 2017-11-08 14:05:00 -07:00
r-r6 Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-randomforest
r-ranger r-ranger: Create new package (#6422) 2017-11-23 09:00:32 +01:00
r-rappdirs r-rappdirs: Create new package. (#6891) 2018-01-14 15:41:32 -06:00
r-raster
r-rbgl
r-rbokeh
r-rcolorbrewer
r-rcpp r-rcpp: adds new versions, fixes failing download in Travis CI (#6464) 2017-11-27 10:15:47 +01:00
r-rcpparmadillo
r-rcppblaze r-rcppblaze: new package (#7209) 2018-02-13 14:07:18 +01:00
r-rcppcctz r-rcppcctz: created new package (#6480) 2017-11-28 09:28:42 +01:00
r-rcppeigen
r-rcppprogress r-cppprogress: Create new package (#6398) 2017-11-21 13:42:44 -07:00
r-rcurl package r-rcurl: boilerplate cleanup (#6771) 2018-01-02 10:58:03 -08:00
r-rda
r-readr
r-readxl r-readxl: Create new package. (#6238) 2017-11-09 13:19:43 -07:00
r-registry
r-rematch r-rematch: Create new package. (#6236) 2017-11-09 13:19:12 -07:00
r-reordercluster
r-reportingtools
r-repr
r-reprex feature/r-reprex: new package (#6257) 2017-11-10 19:47:21 -07:00
r-reshape
r-reshape2
r-rex r-rex: Create new package. (#6221) 2017-11-08 21:57:09 -07:00
r-rgdal r-rgdal: Create new package. (#6593) 2017-12-08 10:18:29 -07:00
r-rgeos r-rgeos: Create new package. (#6592) 2018-01-04 09:01:17 -06:00
r-rgl
r-rgooglemaps
r-rgraphviz r-rgraphviz: Create new package. (#6316) 2018-01-04 09:37:00 -06:00
r-rhdf5 r-rhdf5: Create new package. (#6330) 2017-11-16 09:40:15 -07:00
r-rhtslib r-rhtslib: added build dependency on autoconf (#6627) 2017-12-08 11:18:25 +01:00
r-rinside
r-rjags package/r-rjags: create new package (#6804) 2018-01-03 10:17:15 -06:00
r-rjava
r-rjson
r-rjsonio
r-rlang
r-rmarkdown r-rmarkdown: Update version to 1.7 (#6506) 2018-01-10 23:12:35 -06:00
r-rminer
r-rmpfr
r-rmpi
r-rmysql
r-rngtools
r-robustbase
r-rocr
r-rodbc
r-roxygen2
r-rpart
r-rpart-plot
r-rpostgresql
r-rprojroot r-rprojroot: Create new package. (#6505) 2018-01-10 23:12:54 -06:00
r-rsamtools
r-rsnns
r-rsqlite
r-rstan
r-rstudioapi
r-rtracklayer
r-rtsne r-rtsne: Create new package (#6470) 2017-11-27 13:54:53 -07:00
r-rvcheck r-rvcheck: Create new package. (#6351) 2017-11-17 18:59:00 -07:00
r-rvest r-rvest: created new package (#6220) 2017-11-08 21:56:50 -07:00
r-rzmq
r-s4vectors
r-samr
r-sandwich
r-scales
r-scatterplot3d
r-sdmtools r-sdmtools: Create new package (#6397) 2017-11-21 13:42:28 -07:00
r-segmented
r-selectr r-selectr: created new package (#6218) 2017-11-08 21:56:02 -07:00
r-seqinr
r-seqlogo r-seqlogo: new package (#7229) 2018-02-14 09:42:40 +01:00
r-seurat r-seurat: Create new package (#6477) 2017-11-28 09:27:14 +01:00
r-sfsmisc
r-shape
r-shiny Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-shortread r-shortread: Create new package. (#6332) 2017-11-16 09:30:18 -07:00
r-siggenes
r-simpleaffy
r-sn r-sn: Create new package (#6433) 2017-11-25 12:50:13 -07:00
r-snow
r-snprelate r-snprelate: new package (#7036) 2018-01-23 09:43:22 +01:00
r-som r-som: Create new package (#6364) 2017-11-18 06:35:21 -07:00
r-somaticsignatures
r-sourcetools
r-sp
r-sparsem
r-spdep
r-speedglm
r-sqldf r-sqldf: Create new package. (#6208) 2017-11-08 19:52:08 -07:00
r-stanheaders
r-statmod
r-statnet-common
r-stringi
r-stringr
r-strucchange
r-subplex
r-summarizedexperiment
r-survey
r-survival
r-sva r-sva: Create new package. (#6333) 2017-11-16 09:28:59 -07:00
r-tarifx
r-tclust r-tclust: Create new package (#6380) 2017-11-20 11:57:04 -07:00
r-tensora
r-testit
r-testthat
r-tfmpvalue r-tfmpvalue: new package (#7230) 2018-02-14 08:49:09 +01:00
r-th-data
r-threejs
r-tibble Adding list_url to several R module packages (#6474) 2017-11-28 09:26:06 +01:00
r-tidycensus r-tidycensus: Create new package. (#6595) 2017-12-08 10:18:45 -07:00
r-tidyr
r-tiff r-tiff: created new package (#6134) 2017-11-08 14:05:33 -07:00
r-tigris r-tigris: Create new package. (#6591) 2017-12-08 10:18:11 -07:00
r-timedate r-timedate: Create new package. (#6215) 2017-11-08 19:50:37 -07:00
r-topgo r-topgo: Create new package. (#6479) 2017-11-28 09:27:36 +01:00
r-trimcluster
r-trust
r-tseries r-tseries: Create new package. (#6216) 2017-11-08 21:55:45 -07:00
r-tsne r-tsne: Create new package (#6461) 2017-11-27 09:30:52 +01:00
r-ttr
r-udunits2 r-udunits2: new package r-udunits2 (#6533) 2017-12-01 11:16:35 +01:00
r-units r-units: new package (#6531) 2017-12-01 05:26:05 +01:00
r-utils
r-uuid
r-variantannotation
r-varselrf
r-vcd
r-vegan
r-vgam r-vgam: Create new package (#6363) 2017-11-18 06:39:55 -07:00
r-viridis
r-viridislite
r-visnetwork
r-vsn r-vsn: new package (#6210) 2017-11-08 19:51:35 -07:00
r-whisker
r-withr
r-xde
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge
r-xml
r-xml2 r-xml2: created new package (#6217) 2017-11-08 19:50:53 -07:00
r-xtable
r-xts
r-xvector
r-yaml
r-yapsa
r-yaqcaffy
r-yarn
r-zlibbioc
r-zoo
raft
raja RAJA package: add versions and CUDA/openmp support (#7201) 2018-02-12 10:34:54 -08:00
randfold
random123
randrproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
ravel
raxml
ray
rdp-classifier
re2c re2c@1.0.3: new package (#7092) 2018-01-31 13:46:17 +01:00
readline
recordproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
redundans
relion relion - added new stable version 2.1 (#6706) 2017-12-18 10:38:20 -08:00
rempi
rename
rendercheck Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
renderproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
repeatmasker Do not construct path to perl command manually (#6927) 2018-01-13 22:10:42 -06:00
resourceproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
revbayes
rgb
rhash
rlwrap Add a new package for rlwrap (#6371) 2017-11-19 06:45:25 -07:00
rmlab Rmlab: Control PNG (#6846) 2018-01-08 09:14:38 -06:00
rna-seqc rna-seqc package: JAVA_{ARGS,OPTS} for helper script (#6972) 2018-01-29 20:23:59 -08:00
rockstar
root Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
rose
rr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
rsbench
rsem rsem: update version 1.3.0 md5sum (#6650) 2018-01-02 21:15:40 -06:00
rstart Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
rsync
rtags rtags: add 2.17 and for now comment-out 2.12 (#7126) 2018-01-31 13:36:22 +01:00
rtax
ruby ruby: fix +openssl & +readline variants (#6935) 2018-01-15 09:00:07 -06:00
ruby-gnuplot new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
ruby-narray new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
ruby-rubyinline new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
ruby-terminal-table new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
rust
rust-bindgen
sabre
sailfish sailfish: Create new package (#6827) 2018-01-05 15:08:45 -06:00
salmon salmon: Add version 0.9.1 (#6516) 2017-12-02 12:45:10 -07:00
sambamba
samblaster samblaster: Create new package (#7188) 2018-02-06 13:54:05 +01:00
samrai
samtools
sandbox
sas
satsuma2
savanna
saws
sbt
scala
scalasca
scalpel
scan-for-matches new packages: biopieces and dependencies (#6478) 2017-12-12 18:35:13 -08:00
scons
scorec-core
scorep
scotch Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
scr update scr package for cray (#6407) 2017-11-28 10:33:45 -08:00
screen
scripts Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
scrnsaverproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
sctk
sdl2
sdl2-image
sed
seqprep
seqtk
serf
sessreg Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
setxkbmap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
sga
shapeit
shared-mime-info Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
shiny-server
shortbred shortbred: Create new package (#7210) 2018-02-11 22:26:35 +01:00
shortstack
showfont Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
sickle
siesta Siesta: only apply patch to <4.1 and fix Intel compiler (#6466) 2018-01-06 12:03:54 -06:00
signalp
signify Add new package signify (#6645) 2017-12-16 19:47:59 -07:00
silo Silo: depend on Non-mpi hdf5 (#7275) 2018-02-17 19:37:06 -07:00
simplemoc
simul
simulationio
singularity singularity - added master branch (#6631) 2018-01-02 21:47:21 -06:00
slepc slepc: add 3.8.2 (#6724) 2017-12-19 15:40:30 +01:00
slurm Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
smalt
smproxy Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
snakemake
snap
snap-berkeley
snap-korf
snappy
snbone
sniffles sniffles: add version 1.0.7 (#7004) 2018-01-20 18:39:29 +01:00
snptest
soap2
soapdenovo2 new package: Soapdenovo2 (#7047) 2018-02-20 10:33:41 -08:00
soapindel
soapsnp
somatic-sniper
sortmerna
sosflow Package/sosflow (#6122) 2017-11-08 22:07:37 -07:00
sowing
sox
spades SPAdes: add version 3.11.1 (#6668) 2017-12-13 08:57:29 +01:00
spark
sparsehash
sparta
spdlog
spectrum-mpi Set SMPI library path in dependent packages (#6548) 2018-01-04 09:10:37 -06:00
speex
sph2pipe
spherepack
spindle
spot
sqlite sqlite package: apply B0 patch to additional versions (#6728) 2017-12-19 11:06:39 -08:00
squid
sra-toolkit
sspace-longread
sspace-standard
sst-dumpi
sst-macro
stacks
staden-io-lib
star
star-ccm-plus Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
startup-notification Added i3 and its dependencies. (#6805) 2018-01-04 14:45:25 -06:00
stat
stc fix swift-t packages dependencies (#6530) 2018-01-08 17:25:15 +01:00
stow stow: new package (#7235) 2018-02-14 09:42:05 +01:00
stream
strelka
stress
stringtie stringtie: add version 1.3.4a (#7164) 2018-02-03 09:52:51 +01:00
structure
sublime-text
subread subread: Add version 1.6.0 (#6615) 2017-12-08 10:26:18 +01:00
subversion
suite-sparse suite-sparse: support 64bit BLAS (#6767) 2018-01-03 09:58:19 -06:00
sumaclust
sundials sundials: add the 'headers' and 'libs' properties (#7282) 2018-02-19 22:11:04 -08:00
superlu
superlu-dist
superlu-mt
sw4lite
swarm
swfft swfft: inject CC/CXX (#6666) 2017-12-12 17:25:48 -07:00
swiftsim
swig Create symlink for 'swig' binary after installation. (#6240) 2017-11-10 19:50:11 -07:00
symengine
sympol
sz
tabix
talloc
tantan new package: tantan (#6792) 2018-01-02 12:00:13 -08:00
tar
targetp
task
taskd
tasmanian tasmanian: add new package (#6659) 2017-12-13 16:01:51 +01:00
tassel
tau
tcl
tcoffee
tcsh
tealeaf
tetgen
tethex
texinfo Updated misc devel tools. (#6897) 2018-01-11 10:06:53 -06:00
texlive
the-platinum-searcher
the-silver-searcher Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
thrift
thrust
tig
tinyxml
tinyxml2
tioga Tioga package: Explicitly list MPI compilers for Cmake (#6741) 2018-01-02 13:14:22 -08:00
tk
tmalign
tmhmm
tmux Update tmux to 2.6 (#6597) 2017-12-08 10:13:22 -07:00
tmuxinator
tophat
tppred
transabyss
transdecoder
transposome
transset Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
trapproto
tree
trf
triangle
trilinos Update CGNS and add CGNS capability to Trilinos (#6568) 2017-12-05 14:33:36 -07:00
trimgalore trimgalore: add version 0.4.5 (#6288) 2017-11-14 09:20:20 -07:00
trimmomatic
turbine fix swift-t packages dependencies (#6530) 2018-01-08 17:25:15 +01:00
turbomole
tut
twm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
tycho2
typhonio Changed every docs variant into doc as decided in #2663 (#6412) 2017-11-22 15:06:59 +01:00
uberftp
ucx ucx: update for release 1.2.2 (#6990) 2018-01-18 13:41:16 -07:00
udunits2
ufo-core Add UFO and dependencies (#6337) 2017-11-16 09:37:17 -08:00
ufo-filters Add UFO and dependencies (#6337) 2017-11-16 09:37:17 -08:00
unblur Add a new package: unblur. (#6867) 2018-01-10 09:35:00 -06:00
uncrustify
unibilium
unison
units
unixodbc
usearch
util-linux
util-macros
uuid
valgrind Updated misc devel tools. (#6897) 2018-01-11 10:06:53 -06:00
vampirtrace
vardictjava vardictjava: Adding version 1.4.4 (#7223) 2018-02-14 08:38:06 +01:00
varscan
vc
vcftools Do not construct path to perl command manually (#6927) 2018-01-13 22:10:42 -06:00
vcsh
vdt
vecgeom
veclibfort Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
vegas2
velvet
videoproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
viennarna ViennaRNA: adding version 2.4.3 + disable swig (#6408) 2017-11-27 16:45:43 -07:00
viewres Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
vim make vim python3 compatible (#6925) 2018-01-14 15:39:33 -06:00
virtualgl
visit Visit 2.13.0 (#6947) 2018-01-21 09:16:23 -06:00
vizglow
vmatch
voropp
votca-csg
votca-ctp
votca-moo
votca-tools
votca-xtp
vpfft
vpic
vsearch
vtk Update gl/qt options for vtk package (#6551) 2018-01-22 10:46:44 -08:00
vtkh updates to conduit and ascent packages (new PR) (#6584) 2017-12-08 13:43:12 -08:00
vtkm add alpine ascent (#6224) 2017-11-10 17:00:47 -08:00
wannier90
wget Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
windowswmproto
wt
wx Fix gtkplus build by hardcoding X11 support (#6971) 2018-01-23 15:24:20 -08:00
wxpropgrid
x11perf Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xapian-core
xauth Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xbacklight Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xbiff Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xbitmaps Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xbraid xbraid: add libs method (#7233) 2018-02-14 10:40:56 +01:00
xcalc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-demo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-proto
xcb-util Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-cursor Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-errors Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-image Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-keysyms Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-renderutil Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-wm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcb-util-xrm Added i3 and its dependencies. (#6805) 2018-01-04 14:45:25 -06:00
xclip xclip: created new package (#6248) 2017-11-10 11:13:00 -07:00
xclipboard Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xclock Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcmiscproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcmsdb Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcompmgr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xconsole Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcursor-themes Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xcursorgen Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xdbedizzy Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xditview Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xdm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xdpyinfo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xdriinfo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xedit Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xerces-c
xev Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xextproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xeyes Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xf86bigfontproto
xf86dga Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xf86dgaproto
xf86driproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xf86miscproto
xf86rushproto
xf86vidmodeproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfd Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfindproxy Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfontsel Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfs Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfsinfo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xfwp Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xgamma Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xgc Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xhost Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xineramaproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xinit Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xinput Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xios xios: I/O management for climate models (#6796) 2018-01-04 08:58:24 -06:00
xkbcomp Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xkbdata
xkbevd Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xkbprint Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xkbutils Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xkeyboard-config Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xkill Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xload Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xlogo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xlsatoms Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xlsclients Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xlsfonts Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xmag Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xman Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xmessage Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xmh Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xmlf90 atom-dft: new package plus dependencies (#6653) 2018-01-02 20:32:37 -06:00
xmlto
xmodmap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xmore Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xorg-cf-files Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xorg-docs Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xorg-gtest Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xorg-server Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xorg-sgml-doctools Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xphelloworld Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xplor-nih
xplsprinters Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xpr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xprehashprinterlist Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xprop Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xproto Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xproxymanagementprotocol
xqilla
xrandr Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xrdb Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xrefresh Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xrootd Adding openssl dependency to xrootd. Closes #6601 (#6618) 2017-12-08 10:33:08 +01:00
xrx Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsbench
xscope Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsdk Added Nox for Trilinos installation by xSDK (#7219) 2018-02-13 02:20:59 -08:00
xsdktrilinos
xset Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsetmode Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsetpointer Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsetroot Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xsimd Xtensor 0.15.1 (#7215) 2018-02-11 17:56:08 +01:00
xsm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xstdcmap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xtensor Xtensor 0.15.1 (#7215) 2018-02-11 17:56:08 +01:00
xtensor-python xtensor-python (#7217) 2018-02-11 22:21:45 +01:00
xterm Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xtl Xtensor 0.15.1 (#7215) 2018-02-11 17:56:08 +01:00
xtrans Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xtrap Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xts
xvidtune Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xvinfo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xwd Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xwininfo Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xwud Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
xz
yajl
yambo yambo: added new package (#7301) 2018-02-22 12:11:51 +01:00
yaml-cpp Update checksum for version 0.5.3 of yaml-cpp (#6924) 2018-01-13 22:09:36 -06:00
yasm
yorick
z3
zeromq Introduce virtual dependency pkgconfig (#5198) 2017-11-23 08:05:38 -07:00
zfp
zip
zlib Changed keyword argument 'recurse' to 'recursive' 2018-02-13 02:18:28 -08:00
zoltan zoltan: add optional dependency on parmetis (#6387) 2017-11-23 09:03:02 +01:00
zsh Update zsh to 5.4.2 (#6609) 2017-12-08 10:19:40 -07:00
zstd