631 lines
28 KiB
Python
631 lines
28 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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import os
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from spack.package import *
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from spack.pkg.builtin.boost import Boost
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class Dealii(CMakePackage, CudaPackage):
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"""C++ software library providing well-documented tools to build finite
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element codes for a broad variety of PDEs."""
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homepage = "https://www.dealii.org"
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url = "https://github.com/dealii/dealii/releases/download/v8.4.1/dealii-8.4.1.tar.gz"
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git = "https://github.com/dealii/dealii.git"
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maintainers("jppelteret", "luca-heltai")
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# Don't add RPATHs to this package for the full build DAG.
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# only add for immediate deps.
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transitive_rpaths = False
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generator("ninja")
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version("master", branch="master")
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version("9.4.0", sha256="238677006cd9173658e5b69cdd1861f800556982db6005a3cc5eb8329cc1e36c")
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version("9.3.3", sha256="5dfb59174b341589e92b434398a1b7cc11ad053ce2315cf673f5efc5ba271a29")
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version("9.3.2", sha256="5341d76bfd75d3402fc6907a875513efb5fe8a8b99af688d94443c492d5713e8")
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version("9.3.1", sha256="a62f4676ab2dc029892251d141427fb75cbb83cddd606019f615d0dde9c61ab8")
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version("9.3.0", sha256="aef8c7a87510ce827dfae3bdd4ed7bff82004dc09f96fa7a65b2554f2839b931")
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version("9.2.0", sha256="d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a")
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version("9.1.1", sha256="fc5b483f7fe58dfeb52d05054011280f115498e337af3e085bf272fd1fd81276")
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version("9.1.0", sha256="5b070112403f8afbb72345c1bb24d2a38d11ce58891217e353aab97957a04600")
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version("9.0.1", sha256="df2f0d666f2224be07e3741c0e8e02132fd67ea4579cd16a2429f7416146ee64")
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version("9.0.0", sha256="c918dc5c1a31d62f6eea7b524dcc81c6d00b3c378d4ed6965a708ab548944f08")
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version("8.5.1", sha256="d33e812c21a51f7e5e3d3e6af86aec343155650b611d61c1891fbc3cabce09ae")
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version("8.5.0", sha256="e6913ff6f184d16bc2598c1ba31f879535b72b6dff043e15aef048043ff1d779")
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version("8.4.2", sha256="ec7c00fadc9d298d1a0d16c08fb26818868410a9622c59ba624096872f3058e4")
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version("8.4.1", sha256="00a0e92d069cdafd216816f1aff460f7dbd48744b0d9e0da193287ebf7d6b3ad")
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version("8.4.0", sha256="36a20e097a03f17b557e11aad1400af8c6252d25f7feca40b611d5fc16d71990")
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version("8.3.0", sha256="4ddf72632eb501e1c814e299f32fc04fd680d6fda9daff58be4209e400e41779")
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version("8.2.1", sha256="d75674e45fe63cd9fa294460fe45228904d51a68f744dbb99cd7b60720f3b2a0")
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version("8.1.0", sha256="d666bbda2a17b41b80221d7029468246f2658051b8c00d9c5907cd6434c4df99")
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# Configuration variants
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variant(
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"build_type",
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default="DebugRelease",
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description="The build type to build",
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values=("Debug", "Release", "DebugRelease"),
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)
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variant(
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"cxxstd",
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default="default",
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multi=False,
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description="Compile using the specified C++ standard",
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values=("default", "11", "14", "17"),
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)
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variant("doc", default=False, description="Compile with documentation")
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variant("examples", default=True, description="Compile tutorial programs")
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variant("int64", default=False, description="Compile with 64 bit indices support")
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variant("mpi", default=True, description="Compile with MPI")
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variant("optflags", default=False, description="Compile using additional optimization flags")
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variant("python", default=False, description="Compile with Python bindings")
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# Package variants
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variant("assimp", default=True, description="Compile with Assimp")
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variant("arborx", default=True, description="Compile with Arborx support")
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variant("arpack", default=True, description="Compile with Arpack and PArpack (only with MPI)")
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variant("adol-c", default=True, description="Compile with ADOL-C")
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variant("cgal", default=True, when="@9.4:", description="Compile with CGAL")
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variant("ginkgo", default=True, description="Compile with Ginkgo")
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variant("gmsh", default=True, description="Compile with GMSH")
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variant("gsl", default=True, description="Compile with GSL")
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variant("hdf5", default=True, description="Compile with HDF5 (only with MPI)")
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variant("metis", default=True, description="Compile with Metis")
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variant("muparser", default=True, description="Compile with muParser")
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variant("nanoflann", default=False, description="Compile with Nanoflann")
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variant("netcdf", default=False, description="Compile with Netcdf (only with MPI)")
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variant("oce", default=True, description="Compile with OCE")
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variant("p4est", default=True, description="Compile with P4est (only with MPI)")
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variant("petsc", default=True, description="Compile with Petsc (only with MPI)")
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variant("scalapack", default=True, description="Compile with ScaLAPACK (only with MPI)")
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variant("sundials", default=True, description="Compile with Sundials")
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variant("slepc", default=True, description="Compile with Slepc (only with Petsc and MPI)")
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variant("symengine", default=True, description="Compile with SymEngine")
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variant("simplex", default=True, description="Compile with Simplex support")
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# TODO @9.3: enable by default, when we know what to do
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# variant('taskflow', default=False,
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# description='Compile with multi-threading via Taskflow')
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# TODO @9.3: disable by default
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# (NB: only if tbb is removed in 9.3, as planned!!!)
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variant("threads", default=True, description="Compile with multi-threading via TBB")
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variant("trilinos", default=True, description="Compile with Trilinos (only with MPI)")
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# Required dependencies: Light version
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depends_on("blas")
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# Boost 1.58 is blacklisted, require at least 1.59, see
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# https://github.com/dealii/dealii/issues/1591
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# There are issues with 1.65.1 and 1.65.0:
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# https://github.com/dealii/dealii/issues/5262
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# we take the patch from https://github.com/boostorg/serialization/pull/79
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# more precisely its variation https://github.com/dealii/dealii/pull/5572#issuecomment-349742019
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# 1.68.0 has issues with serialization https://github.com/dealii/dealii/issues/7074
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# adopt https://github.com/boostorg/serialization/pull/105 as a fix
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#
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# dealii does not build with Boost 1.80.0
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# (https://github.com/spack/spack/pull/32879#issuecomment-1265933265)
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depends_on(
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"boost@1.59.0:1.63,1.65.1,1.67.0:1.79+thread+system+serialization+iostreams",
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patches=[
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patch("boost_1.65.1_singleton.patch", level=1, when="@1.65.1"),
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patch("boost_1.68.0.patch", level=1, when="@1.68.0"),
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],
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when="~python",
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)
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depends_on(
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"boost@1.59.0:1.63,1.65.1,1.67.0:1.79+thread+system+serialization+iostreams+python",
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patches=[
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patch("boost_1.65.1_singleton.patch", level=1, when="@1.65.1"),
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patch("boost_1.68.0.patch", level=1, when="@1.68.0"),
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],
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when="+python",
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)
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# boost@1.77.0 triggers build errors in dealii@9.3.1
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depends_on("boost@:1.76", when="@:9.3")
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# The std::auto_ptr is removed in the C++ 17 standard.
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# See https://github.com/dealii/dealii/issues/4662
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# and related topics discussed for other software libraries.
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depends_on("boost cxxstd=11", when="cxxstd=11")
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depends_on("boost cxxstd=14", when="cxxstd=14")
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depends_on("boost cxxstd=17", when="cxxstd=17")
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depends_on("bzip2", when="@:8")
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# TODO: replace this with an explicit list of components of Boost,
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# for instance depends_on('boost +filesystem')
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# See https://github.com/spack/spack/pull/22303 for reference
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depends_on(Boost.with_default_variants)
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depends_on("lapack")
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depends_on("suite-sparse")
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depends_on("zlib")
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# Optional dependencies: Configuration
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depends_on("cuda@8:", when="+cuda")
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depends_on("cmake@3.9:", when="+cuda", type="build")
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# Older version of deal.II do not build with Cmake 3.10, see
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# https://github.com/dealii/dealii/issues/5510
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depends_on("cmake@:3.9", when="@:8", type="build")
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depends_on("mpi", when="+mpi")
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depends_on("python", when="@8.5.0:+python")
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# Optional dependencies: Packages
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depends_on("adol-c@2.6.4:", when="@9.0:+adol-c")
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depends_on("arborx", when="@9.3:+arborx")
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depends_on("arborx+trilinos", when="@9.3:+arborx+trilinos")
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depends_on("arpack-ng+mpi", when="+arpack+mpi")
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depends_on("assimp", when="@9.0:+assimp")
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depends_on("cgal", when="@9.4:+cgal")
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depends_on("doxygen+graphviz", when="+doc")
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depends_on("graphviz", when="+doc")
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depends_on("ginkgo", when="@9.1:+ginkgo")
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depends_on("ginkgo@1.4.0:", when="@9.4:+ginkgo")
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depends_on("gmsh+tetgen+netgen+oce", when="@9.0:+gmsh", type=("build", "run"))
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depends_on("gsl", when="@8.5.0:+gsl")
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# TODO: next line fixes concretization with petsc
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depends_on("hdf5+mpi+hl+fortran", when="+hdf5+mpi+petsc")
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depends_on("hdf5+mpi+hl", when="+hdf5+mpi~petsc")
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# TODO: concretizer bug. The two lines mimic what comes from PETSc
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# but we should not need it
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depends_on("metis@5:+int64", when="+metis+int64")
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depends_on("metis@5:~int64", when="+metis~int64")
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depends_on("muparser", when="+muparser")
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# Nanoflann support has been removed after 9.2.0
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depends_on("nanoflann", when="@9.0:9.2+nanoflann")
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depends_on("netcdf-c+mpi", when="+netcdf+mpi")
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depends_on("netcdf-cxx", when="+netcdf+mpi")
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depends_on("oce", when="+oce")
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depends_on("p4est", when="+p4est+mpi")
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depends_on("petsc+mpi~int64", when="+petsc+mpi~int64")
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depends_on("petsc+mpi+int64", when="+petsc+mpi+int64")
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depends_on("scalapack", when="@9.0:+scalapack")
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depends_on("slepc", when="+slepc+petsc+mpi")
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depends_on("slepc~arpack", when="+slepc+petsc+mpi+int64")
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depends_on("sundials@:3~pthread", when="@9.0:9.2+sundials")
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depends_on("sundials@5:5.8", when="@9.3:9.3.3+sundials")
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depends_on("sundials@5:", when="@9.3.4:+sundials")
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# depends_on('taskflow', when='@9.3:+taskflow')
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depends_on("trilinos gotype=int", when="+trilinos@12.18.1:")
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# TODO: next line fixes concretization with trilinos and adol-c
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depends_on("trilinos~exodus", when="@9.0:+adol-c+trilinos")
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# Both Trilinos and SymEngine bundle the Teuchos RCP library.
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# This leads to conflicts between macros defined in the included
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# headers when they are not compiled in the same mode.
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# See https://github.com/symengine/symengine/issues/1516
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# TODO: uncomment when the following is fixed
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# https://github.com/spack/spack/issues/11160
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# depends_on(
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# "symengine@0.4: build_type=Release",
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# when="@9.1:+symengine+trilinos^trilinos~debug"
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# )
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# depends_on(
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# "symengine@0.4: build_type=Debug",
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# when="@9.1:+symengine+trilinos^trilinos+debug"
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# )
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depends_on("symengine@0.4:", when="@9.1:+symengine")
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depends_on("symengine@0.6:", when="@9.2:+symengine")
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depends_on("tbb", when="+threads")
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# do not require +rol to make concretization of xsdk possible
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depends_on("trilinos+amesos+aztec+epetra+ifpack+ml+muelu+sacado", when="+trilinos")
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depends_on("trilinos~hypre", when="+trilinos+int64")
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# TODO: temporary disable Tpetra when using CUDA due to
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# namespace "Kokkos::Impl" has no member "cuda_abort"
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depends_on(
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"trilinos@master+rol~amesos2~ifpack2~intrepid2~kokkos~tpetra~zoltan2",
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when="+trilinos+cuda",
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)
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# Explicitly provide a destructor in BlockVector,
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# otherwise deal.II may fail to build with Intel compilers.
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patch(
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"https://github.com/dealii/dealii/commit/a89d90f9993ee9ad39e492af466b3595c06c3e25.patch?full_index=1",
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sha256="72304bc6c3fb4549cf53ed533a00311d12827d48817e2038efd3a8ef6c43d149",
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when="@9.0.1",
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)
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# https://github.com/dealii/dealii/pull/7935
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patch(
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"https://github.com/dealii/dealii/commit/f8de8c5c28c715717bf8a086e94f071e0fe9deab.patch?full_index=1",
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sha256="4aba56b01d816ca950b1625f436840df253f145650e3a3eba51e7f2696ec7dc0",
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when="@9.0.1 ^boost@1.70.0:",
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)
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# Fix TBB version check
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# https://github.com/dealii/dealii/pull/9208
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patch(
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"https://github.com/dealii/dealii/commit/80b13fe5a2eaefc77fa8c9266566fa8a2de91edf.patch?full_index=1",
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sha256="3da530766050a0cea80106684347055bdb78528a1869ce99e8fbf8fc83074fd0",
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when="@9.0.0:9.1.1",
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)
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# Explicitly include a boost header, otherwise deal.II fails to compile
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# https://github.com/dealii/dealii/pull/11438
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patch(
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"https://github.com/dealii/dealii/commit/3b815e21c4bfd82c792ba80e4d90314c8bb9edc9.patch?full_index=1",
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sha256="90ae9ddefe77fffd297bba6b070ab68d07306d4ef525ee994e8c49cef68f76f3",
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when="@9.2.0 ^boost@1.72.0:",
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)
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# Fix issues due to override of CMake FIND_PACKAGE macro
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# https://github.com/dealii/dealii/pull/14158/files
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patch(
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"https://github.com/dealii/dealii/commit/06bb9dc07efb6fea9912ee0d66264af548c552c8.patch?full_index=1",
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sha256="8a1f7b9a155c8c496ce08b2abb1ba5d329b3b29169f36c11678aa4e3cebf97a2",
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when="@9.4.0 ^hdf5",
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)
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patch(
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"https://github.com/dealii/dealii/commit/40076ac1a013cd7d221f9dda913b4d0e6452c21e.patch?full_index=1",
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sha256="7869dfab1116b6e862279bb6642c2c8fe49d87c42cfc6f031e03330f9f26a6c3",
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when="@9.4.0 ^python",
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)
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# Fix issues with the FIND_GINKGO module for the newer Ginkgo versions
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# https://github.com/dealii/dealii/pull/14413
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patch(
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"https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1",
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sha256="c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e",
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when="@:9.4.0+ginkgo ^ginkgo@1.5.0:",
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)
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# Check for sufficiently modern versions
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conflicts("cxxstd=11", when="@9.3:")
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conflicts(
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"cxxstd=14",
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when="@9.4:+cgal",
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msg="CGAL requires the C++ standard to be set to 17 or later.",
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)
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# Interfaces added in 8.5.0:
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for p in ["gsl", "python"]:
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conflicts(
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"+{0}".format(p),
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when="@:8.4.2",
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msg="The interface to {0} is supported from version 8.5.0 "
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"onwards. Please explicitly disable this variant "
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"via ~{0}".format(p),
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)
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# Interfaces added in 9.0.0:
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for p in ["assimp", "gmsh", "nanoflann", "scalapack", "sundials", "adol-c"]:
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conflicts(
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"+{0}".format(p),
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when="@:8.5.1",
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msg="The interface to {0} is supported from version 9.0.0 "
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"onwards. Please explicitly disable this variant "
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"via ~{0}".format(p),
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)
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# interfaces added in 9.1.0:
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for p in ["ginkgo", "symengine"]:
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conflicts(
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"+{0}".format(p),
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when="@:9.0",
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msg="The interface to {0} is supported from version 9.1.0 "
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"onwards. Please explicitly disable this variant "
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"via ~{0}".format(p),
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)
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# interfaces added in 9.3.0:
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for p in ["simplex", "arborx"]: # , 'taskflow']:
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conflicts(
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"+{0}".format(p),
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when="@:9.2",
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msg="The interface to {0} is supported from version 9.3.0 "
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"onwards. Please explicitly disable this variant "
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"via ~{0}".format(p),
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)
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# Interfaces removed in 9.3.0:
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conflicts(
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"+nanoflann",
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when="@9.3.0:",
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msg="The interface to Nanoflann was removed from version 9.3.0. "
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"Please explicitly disable this variant via ~nanoflann",
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)
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# Check that the combination of variants makes sense
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# 64-bit BLAS:
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for p in ["openblas", "intel-mkl", "intel-parallel-studio+mkl"]:
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conflicts(
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"^{0}+ilp64".format(p), when="@:8.5.1", msg="64bit BLAS is only supported from 9.0.0"
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)
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# MPI requirements:
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for p in ["arpack", "hdf5", "netcdf", "p4est", "petsc", "scalapack", "slepc", "trilinos"]:
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conflicts(
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"+{0}".format(p),
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when="~mpi",
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msg="To enable {0} it is necessary to build deal.II with "
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"MPI support enabled.".format(p),
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)
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# Optional dependencies:
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conflicts(
|
|
"+adol-c", when="^netcdf", msg="Symbol clash between the ADOL-C library and " "Netcdf."
|
|
)
|
|
conflicts(
|
|
"+adol-c",
|
|
when="^trilinos+chaco",
|
|
msg="Symbol clash between the ADOL-C library and " "Trilinos SEACAS Chaco.",
|
|
)
|
|
conflicts(
|
|
"+adol-c",
|
|
when="^trilinos+exodus",
|
|
msg="Symbol clash between the ADOL-C library and " "Trilinos Netcdf.",
|
|
)
|
|
|
|
conflicts(
|
|
"+slepc",
|
|
when="~petsc",
|
|
msg="It is not possible to enable slepc interfaces " "without petsc.",
|
|
)
|
|
|
|
def cmake_args(self):
|
|
spec = self.spec
|
|
options = []
|
|
# Release flags
|
|
cxx_flags_release = []
|
|
# Debug and release flags
|
|
cxx_flags = []
|
|
|
|
# Set directory structure:
|
|
if spec.satisfies("@:8.2.1"):
|
|
options.append(self.define("DEAL_II_COMPONENT_COMPAT_FILES", False))
|
|
else:
|
|
options.extend(
|
|
[
|
|
self.define("DEAL_II_EXAMPLES_RELDIR", "share/deal.II/examples"),
|
|
self.define("DEAL_II_DOCREADME_RELDIR", "share/deal.II/"),
|
|
self.define("DEAL_II_DOCHTML_RELDIR", "share/deal.II/doc"),
|
|
]
|
|
)
|
|
|
|
# Required dependencies
|
|
lapack_blas_libs = spec["lapack"].libs + spec["blas"].libs
|
|
lapack_blas_headers = spec["lapack"].headers + spec["blas"].headers
|
|
options.extend(
|
|
[
|
|
self.define("BOOST_DIR", spec["boost"].prefix),
|
|
# CMake's FindBlas/Lapack may pickup system's blas/lapack instead
|
|
# of Spack's. Be more specific to avoid this.
|
|
# Note that both lapack and blas are provided in -DLAPACK_XYZ.
|
|
self.define("LAPACK_FOUND", True),
|
|
self.define("LAPACK_INCLUDE_DIRS", ";".join(lapack_blas_headers.directories)),
|
|
self.define("LAPACK_LIBRARIES", lapack_blas_libs.joined(";")),
|
|
self.define("UMFPACK_DIR", spec["suite-sparse"].prefix),
|
|
self.define("ZLIB_DIR", spec["zlib"].prefix),
|
|
self.define("DEAL_II_ALLOW_BUNDLED", False),
|
|
]
|
|
)
|
|
|
|
if spec.satisfies("@:8"):
|
|
options.extend(
|
|
[
|
|
# Cmake may still pick up system's bzip2, fix this:
|
|
self.define("BZIP2_FOUND", True),
|
|
self.define("BZIP2_INCLUDE_DIRS", spec["bzip2"].prefix.include),
|
|
self.define("BZIP2_LIBRARIES", spec["bzip2"].libs.joined(";")),
|
|
]
|
|
)
|
|
|
|
# Doxygen documentation
|
|
options.append(self.define_from_variant("DEAL_II_COMPONENT_DOCUMENTATION", "doc"))
|
|
|
|
# Examples / tutorial programs
|
|
options.append(self.define_from_variant("DEAL_II_COMPONENT_EXAMPLES", "examples"))
|
|
|
|
# Enforce the specified C++ standard
|
|
if spec.variants["cxxstd"].value != "default":
|
|
cxxstd = spec.variants["cxxstd"].value
|
|
cxx_flags.extend(["-std=c++{0}".format(cxxstd)])
|
|
|
|
# Performance
|
|
# Set recommended flags for maximum (matrix-free) performance, see
|
|
# https://groups.google.com/forum/?fromgroups#!topic/dealii/3Yjy8CBIrgU
|
|
if spec.satisfies("%gcc"):
|
|
cxx_flags_release.extend(["-O3"])
|
|
elif spec.satisfies("%intel"):
|
|
cxx_flags_release.extend(["-O3"])
|
|
elif spec.satisfies("%clang") or spec.satisfies("%apple-clang"):
|
|
cxx_flags_release.extend(["-O3", "-ffp-contract=fast"])
|
|
|
|
# 64 bit indices
|
|
options.append(self.define_from_variant("DEAL_II_WITH_64BIT_INDICES", "int64"))
|
|
|
|
if (
|
|
spec.satisfies("^openblas+ilp64")
|
|
or spec.satisfies("^intel-mkl+ilp64")
|
|
or spec.satisfies("^intel-parallel-studio+mkl+ilp64")
|
|
):
|
|
options.append(self.define("LAPACK_WITH_64BIT_BLAS_INDICES", True))
|
|
|
|
# CUDA
|
|
options.append(self.define_from_variant("DEAL_II_WITH_CUDA", "cuda"))
|
|
if "+cuda" in spec:
|
|
if not spec.satisfies("^cuda@9:"):
|
|
options.append("-DDEAL_II_WITH_CXX14=OFF")
|
|
cuda_arch = spec.variants["cuda_arch"].value
|
|
if cuda_arch != "none":
|
|
if len(cuda_arch) > 1:
|
|
raise InstallError("deal.II only supports compilation for a single GPU!")
|
|
flags = "-arch=sm_{0}".format(cuda_arch[0])
|
|
# TODO: there are some compiler errors in dealii
|
|
# with: flags = ' '.join(self.cuda_flags(cuda_arch))
|
|
# Stick with -arch=sm_xy for now.
|
|
options.append(self.define("DEAL_II_CUDA_FLAGS", flags))
|
|
|
|
# MPI
|
|
options.append(self.define_from_variant("DEAL_II_WITH_MPI", "mpi"))
|
|
if "+mpi" in spec:
|
|
options.extend(
|
|
[
|
|
self.define("CMAKE_C_COMPILER", spec["mpi"].mpicc),
|
|
self.define("CMAKE_CXX_COMPILER", spec["mpi"].mpicxx),
|
|
self.define("CMAKE_Fortran_COMPILER", spec["mpi"].mpifc),
|
|
self.define("MPI_C_COMPILER", spec["mpi"].mpicc),
|
|
self.define("MPI_CXX_COMPILER", spec["mpi"].mpicxx),
|
|
self.define("MPI_Fortran_COMPILER", spec["mpi"].mpifc),
|
|
]
|
|
)
|
|
# FIXME: Fix issues with undefined references in MPI. e.g,
|
|
# libmpi.so: undefined reference to `opal_memchecker_base_isaddressable'
|
|
if "^openmpi" in spec:
|
|
options.extend([self.define("MPI_CXX_LINK_FLAGS", "-lopen-pal")])
|
|
if "+cuda" in spec:
|
|
options.extend(
|
|
[
|
|
self.define(
|
|
"DEAL_II_MPI_WITH_CUDA_SUPPORT", spec["mpi"].satisfies("+cuda")
|
|
),
|
|
self.define("CUDA_HOST_COMPILER", spec["mpi"].mpicxx),
|
|
]
|
|
)
|
|
|
|
# Python bindings
|
|
if spec.satisfies("@8.5.0:"):
|
|
options.append(self.define_from_variant("DEAL_II_COMPONENT_PYTHON_BINDINGS", "python"))
|
|
if "+python" in spec:
|
|
python_exe = spec["python"].command.path
|
|
python_library = spec["python"].libs[0]
|
|
python_include = spec["python"].headers.directories[0]
|
|
options.extend(
|
|
[
|
|
self.define("PYTHON_EXECUTABLE", python_exe),
|
|
self.define("PYTHON_INCLUDE_DIR", python_include),
|
|
self.define("PYTHON_LIBRARY", python_library),
|
|
]
|
|
)
|
|
|
|
# Simplex support (no longer experimental)
|
|
if spec.satisfies("@9.3.0:9.4.0"):
|
|
options.append(self.define_from_variant("DEAL_II_WITH_SIMPLEX_SUPPORT", "simplex"))
|
|
|
|
# Threading
|
|
if spec.satisfies("@9.3.0:"):
|
|
options.append(self.define_from_variant("DEAL_II_WITH_TBB", "threads"))
|
|
else:
|
|
options.append(self.define_from_variant("DEAL_II_WITH_THREADS", "threads"))
|
|
if "+threads" in spec:
|
|
if spec.satisfies("^intel-parallel-studio+tbb"):
|
|
# deal.II/cmake will have hard time picking up TBB from Intel.
|
|
tbb_ver = ".".join(("%s" % spec["tbb"].version).split(".")[1:])
|
|
options.extend(
|
|
[
|
|
self.define("TBB_FOUND", True),
|
|
self.define("TBB_VERSION", tbb_ver),
|
|
self.define("TBB_INCLUDE_DIRS", ";".join(spec["tbb"].headers.directories)),
|
|
self.define("TBB_LIBRARIES", spec["tbb"].libs.joined(";")),
|
|
]
|
|
)
|
|
else:
|
|
options.append(self.define("TBB_DIR", spec["tbb"].prefix))
|
|
|
|
# Optional dependencies for which library names are the same as CMake
|
|
# variables:
|
|
for library in (
|
|
"gsl",
|
|
"hdf5",
|
|
"p4est",
|
|
"petsc",
|
|
"slepc",
|
|
"trilinos",
|
|
"metis",
|
|
"sundials",
|
|
"nanoflann",
|
|
"assimp",
|
|
"gmsh",
|
|
"muparser",
|
|
"symengine",
|
|
"ginkgo",
|
|
"arborx",
|
|
"cgal",
|
|
): # 'taskflow'):
|
|
options.append(
|
|
self.define_from_variant("DEAL_II_WITH_{0}".format(library.upper()), library)
|
|
)
|
|
if ("+" + library) in spec:
|
|
options.append(
|
|
self.define("{0}_DIR".format(library.upper()), spec[library].prefix)
|
|
)
|
|
|
|
# Optional dependencies that do not fit the above pattern:
|
|
# ADOL-C
|
|
options.append(self.define_from_variant("DEAL_II_WITH_ADOLC", "adol-c"))
|
|
if "+adol-c" in spec:
|
|
options.append(self.define("ADOLC_DIR", spec["adol-c"].prefix))
|
|
|
|
# ARPACK
|
|
options.append(self.define_from_variant("DEAL_II_WITH_ARPACK", "arpack"))
|
|
if "+arpack" in spec and "+mpi" in spec:
|
|
options.extend(
|
|
[
|
|
self.define("ARPACK_DIR", spec["arpack-ng"].prefix),
|
|
self.define("DEAL_II_ARPACK_WITH_PARPACK", True),
|
|
]
|
|
)
|
|
|
|
# NetCDF
|
|
# since Netcdf is spread among two, need to do it by hand:
|
|
if "+netcdf" in spec and "+mpi" in spec:
|
|
netcdf_libs = spec["netcdf-cxx"].libs + spec["netcdf-c"].libs
|
|
options.extend(
|
|
[
|
|
self.define("NETCDF_FOUND", True),
|
|
self.define(
|
|
"NETCDF_INCLUDE_DIRS",
|
|
"{0};{1}".format(
|
|
spec["netcdf-cxx"].prefix.include, spec["netcdf-c"].prefix.include
|
|
),
|
|
),
|
|
self.define("NETCDF_LIBRARIES", netcdf_libs.joined(";")),
|
|
]
|
|
)
|
|
else:
|
|
options.append(self.define("DEAL_II_WITH_NETCDF", False))
|
|
|
|
# ScaLAPACK
|
|
options.append(self.define_from_variant("DEAL_II_WITH_SCALAPACK", "scalapack"))
|
|
if "+scalapack" in spec:
|
|
scalapack_libs = spec["scalapack"].libs
|
|
options.extend(
|
|
[
|
|
self.define("SCALAPACK_FOUND", True),
|
|
self.define("SCALAPACK_INCLUDE_DIRS", spec["scalapack"].prefix.include),
|
|
self.define("SCALAPACK_LIBRARIES", scalapack_libs.joined(";")),
|
|
# If SCALAPACK_LIBRARY is not set, deal.II still searches
|
|
# for SCALAPACK despite the above settings:
|
|
self.define("SCALAPACK_LIBRARY", scalapack_libs.joined(";")),
|
|
]
|
|
)
|
|
|
|
# Open Cascade
|
|
options.append(self.define_from_variant("DEAL_II_WITH_OPENCASCADE", "oce"))
|
|
if "+oce" in spec:
|
|
options.append(self.define("OPENCASCADE_DIR", spec["oce"].prefix))
|
|
|
|
# As a final step, collect CXX flags that may have been
|
|
# added anywhere above:
|
|
if len(cxx_flags_release) > 0 and "+optflags" in spec:
|
|
options.extend([self.define("CMAKE_CXX_FLAGS_RELEASE", " ".join(cxx_flags_release))])
|
|
if len(cxx_flags) > 0:
|
|
options.extend([self.define("CMAKE_CXX_FLAGS", " ".join(cxx_flags))])
|
|
|
|
# Add flags for machine vectorization, used when tutorials
|
|
# and user code is built.
|
|
# See https://github.com/dealii/dealii/issues/9164
|
|
options.append(self.define("DEAL_II_CXX_FLAGS", os.environ["SPACK_TARGET_ARGS"]))
|
|
|
|
return options
|
|
|
|
def setup_run_environment(self, env):
|
|
env.set("DEAL_II_DIR", self.prefix)
|
|
|
|
def setup_build_environment(self, env):
|
|
spec = self.spec
|
|
if "+cuda" in spec and "+mpi" in spec:
|
|
env.set("CUDAHOSTCXX", spec["mpi"].mpicxx)
|