db149876a4
* htslib: add version 1.6 * samtools: add version 1.6, remove zlib dependency * bcftools: add version 1.6, switch to using standalone htslib
41 lines
1.7 KiB
Python
41 lines
1.7 KiB
Python
##############################################################################
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# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/llnl/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Htslib(AutotoolsPackage):
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"""C library for high-throughput sequencing data formats."""
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homepage = "https://github.com/samtools/htslib"
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url = "https://github.com/samtools/htslib/releases/download/1.3.1/htslib-1.3.1.tar.bz2"
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version('1.6', 'd6fd14e208aca7e08cbe9072233d0af9')
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version('1.4', '2a22ff382654c033c40e4ec3ea880050')
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version('1.3.1', '16d78f90b72f29971b042e8da8be6843')
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depends_on('zlib')
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depends_on('bzip2', when="@1.4:")
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depends_on('xz', when="@1.4:")
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