36 lines
1.6 KiB
Python
36 lines
1.6 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RIranges(RPackage):
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"""Provides efficient low-level and highly
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reusable S4 classes for storing,
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manipulating and aggregating over annotated ranges of
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integers. Implements an
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algebra of range operations, including efficient
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algorithms for finding overlaps
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and nearest neighbors. Defines efficient list-like
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classes for storing, transforming
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and aggregating large grouped data,
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i.e., collections of atomic vectors and DataFrames."""
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homepage = "https://www.bioconductor.org/packages/IRanges/"
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git = "https://git.bioconductor.org/packages/IRanges.git"
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version('2.14.10', commit='c76118a38e84c7c764141adbd66ee350d0882bc9')
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version('2.12.0', commit='1b1748655a8529ba87ad0f223f035ef0c08e7fcd')
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version('2.10.5', commit='b00d1d5025e3c480d17c13100f0da5a0132b1614')
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depends_on('r-biocgenerics@0.21.1:', type=('build', 'run'), when='@2.10.5')
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depends_on('r-biocgenerics@0.23.3:', type=('build', 'run'), when='@2.12.0')
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depends_on('r-biocgenerics@0.25.3:', type=('build', 'run'), when='@2.14.10')
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depends_on('r-s4vectors@0.13.17:', type=('build', 'run'), when='@2.10.5')
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depends_on('r-s4vectors@0.15.5:', type=('build', 'run'), when='@2.12.0')
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depends_on('r-s4vectors@0.18.2:', type=('build', 'run'), when='@2.14.10')
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depends_on('r@3.4.0:3.4.9', when='@2.10.5', type=('build', 'run'))
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depends_on('r@3.5.0:3.5.9', when='@2.14.10', type=('build', 'run'))
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